Gene detail information of Glyur000036s00004678 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11380.1 | 3.00E-12 | PLAC8 family protein |
| NR | XP_003608273.1 | 7.79E-18 | hypothetical protein MTR_4g091550 [Medicago truncatula] |
| trEMBL | tr|Q2HTU7|Q2HTU7_MEDTR | 3.00E-18 | Uncharacterized Cys-rich domain {ECO:0000313|EMBL:ABD32347.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 450902 | 452720 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.589 |
| SRR1783600 | control | 10.241 |
| SRR1783602 | moderate drought stress | 19.518 |
| SRR1811619 | moderate drought stress | 17.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.274 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.261 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.159 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.426 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.674 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.787 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.357 |
| SRR2868004 | Drought Stress (root) | 16.678 |
| SRR2967015 | Control (root) | 16.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.872 |
| SRR9715740 | Leaf | 10.971 |
| SRR9715741 | Leaf | 11.741 |
| SRR9715739 | Root | 0.693 |
| SRR9715742 | Root | 3.179 |
| SRR9715743 | Root | 2.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.118 |
| SRR8749028 | MeJA induced 9h | 9.054 |
| SRR8749029 | MeJA induced 9h | 7.471 |
| SRR8749030 | Uninduced | 9.572 |
| SRR8749031 | Uninduced | 6.696 |
| SRR8749032 | Uninduced | 7.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.172 |
| SRR8400027 | Control - Root | 19.256 |