Gene detail

Gene detail information of Glyur000036s00004671

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64500.1	6.00E-54	Glutaredoxin family protein
NR	KEH21255.1	1.53E-143	glutaredoxin (GRX) family protein [Medicago truncatula]
COG	YP_002727166.1	4.00E-07	glutaredoxin family protein [Wolbachia sp. wRi]
Swissprot	tr\|Q9LH89\|Y3885_ARATH	1.00E-32	Uncharacterized protein At3g28850
trEMBL	tr\|A0A072U5Y7\|A0A072U5Y7_MEDTR	6.00E-144	Glutaredoxin (GRX) family protein {ECO:0000313\|EMBL:KEH21255.1}

Sequence

Transcript Sequence

>Glyur000036s00004671.1
ATGGGGTGTGCGTCGTCGAAGCGTATAGAGGCGACCACTACAGCCGTATACCAACCACCACCGACGAGCTTCGCGGTGTTTGACATCAACGCCATAGAGGAGCCATGGATCAAACACCTCAACAACACCACAATTGTCGAAGACACCAACAAACCCACGCAGCTACCTCCCCCAATTCTCCACAAGCTCAACAACATGCTTGACGCCACCGAAGCCCCTCAATCCTGGGACGAGGTCAGCAAGGCTCTCCAAGACCTCAAACCCATAGTTCAACAACAACAACCACCACCATCCAGTACTTCACCACCCCCACCACNACAACAACAACAACAACAACCACAACCACAACCACCACGCAAGGTTGCATCCTTCCACACACTCGAAGAGTTAGATGCCAAATTAACCTCCCCCAAGCCCAATTCTCCAGCCCCTAATAAGACCAACAGGAATATTATTAAGTCCCAACAACAACCACCACCACCACCAATACAACCAATGGAAGATGATGACGTGGCAGGAGGAGGAGTGGGGAGAATAATAAAGCCGGTGAAGGAGAANATATTCATAGTGAGAGACAGGATGGAGAGGCAAAAGGGAGAGACGGAGGCGAACTACGAGAAGAGGGTGAGGTGGGAGAGGGACCCACTCAGCCACTACCCGGAGAGNTGCCCGCCGGGGGGAGGAGAGGCGGTGGTGATATACACGACGTCGTTGGGGGGAGTGAGGAAGACGTTCGNGGAGTGCAACAGGGCGAGGGACATTTTGGAGGGACACAGGGTGGTGTTCGACGAGCGTGACGTGGCGCTGCACGGGGAGTTCCTGAAGGAGATCAAGGAGTTGGTTGGGGAGGTGGCGCTGCCGAGGGTGTTCGTGAAGGGGAGGTACCTGGGCGGGTTGGAGGAGCTGGTGGAACTCAACGAGACGGGTCGACTCGGGAGGATGCTGAATGCGACCCGTGTGGTGAGAGGGGCTGGCAGGCTCGGGTGTGGTGGGTGTGGTGGGGCCAGGTTCGTGCCCTGTTTGGATTGTGGTGGTANCTGCAAGGTGGTCCTCGCTGACGCGCCTGACAAATTACAGAGGTGCCCCAAGTGTAACGAGAATGGGCTAGTGCATTGCCCCGCTTGCTTGTATTTGAGTAGTACTACTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00036	417029	418177	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045454 cell redox homeostasis

molecular_function

GO:0009055 electron carrier activity

GO:0015035 protein disulfide oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000036s00004671.1	PF00462.19	Glutaredoxin	231	295	8.80E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.253
SRR1783600	control	0.229
SRR1783602	moderate drought stress	0.066
SRR1811619	moderate drought stress	0.064

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.097
DRR006522	Root Winter glycyrrhizin high producing strain	0.095
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	212.782
DRR006526	Leaf Summer glycyrrhizin high producing strain	195.699

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.203
SRR2868004	Drought Stress (root)	0.149
SRR2967015	Control (root)	0.335

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	293.528
SRR9715740	Leaf	455.025
SRR9715741	Leaf	316.524
SRR9715739	Root	0.280
SRR9715742	Root	0.158
SRR9715743	Root	0.408

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.053
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.315
SRR8400027	Control - Root	1.194