Gene detail information of Glyur000036s00004670 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10910.1 | 2.00E-08 | |
| NR | XP_007160185.1 | 1.06E-86 | hypothetical protein PHAVU_002G300100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQ00|V7CQ00_PHAVU | 4.00E-87 | Uncharacterized protein {ECO:0000313|EMBL:ESW32179.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 411748 | 412368 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004670.1 | PF14009.1 | DUF4228 | 1 | 199 | 5.80E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.251 |
| SRR1783600 | control | 1.234 |
| SRR1783602 | moderate drought stress | 0.818 |
| SRR1811619 | moderate drought stress | 0.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.747 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.539 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.558 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.395 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.670 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.978 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.150 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.648 |
| SRR2868004 | Drought Stress (root) | 2.587 |
| SRR2967015 | Control (root) | 5.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.096 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.444 |
| SRR9715739 | Root | 4.124 |
| SRR9715742 | Root | 1.310 |
| SRR9715743 | Root | 2.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.384 |
| SRR8749028 | MeJA induced 9h | 4.180 |
| SRR8749029 | MeJA induced 9h | 8.183 |
| SRR8749030 | Uninduced | 0.003 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.909 |
| SRR8400027 | Control - Root | 1.423 |