Gene detail information of Glyur000036s00004662 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64480.1 | 3.00E-53 | calcineurin B-like protein 8 |
| NR | XP_004503608.1 | 2.52E-92 | PREDICTED: calcineurin B-like protein 8-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9FUQ7|CNBL8_ARATH | 5.00E-65 | Calcineurin B-like protein 8 |
| trEMBL | tr|A0A072TVP0|A0A072TVP0_MEDTR | 1.00E-89 | Calcineurin B-like protein 4-1 {ECO:0000313|EMBL:KEH21241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 366361 | 373219 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004662.1 | PF13833.1 | EF-hand_8 | 67 | 111 | 0.00051 |
| Glyur000036s00004662.1 | PF13202.1 | EF-hand_5 | 191 | 212 | 3.10E-05 |
| Glyur000036s00004662.2 | PF13405.1 | EF-hand_6 | 49 | 72 | 0.0016 |
| Glyur000036s00004662.2 | PF13499.1 | EF-hand_7 | 86 | 151 | 8.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.824 |
| SRR1783600 | control | 5.864 |
| SRR1783602 | moderate drought stress | 5.695 |
| SRR1811619 | moderate drought stress | 5.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.520 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.536 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.234 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.918 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.307 |
| SRR2868004 | Drought Stress (root) | 51.060 |
| SRR2967015 | Control (root) | 35.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.460 |
| SRR9715740 | Leaf | 6.210 |
| SRR9715741 | Leaf | 8.270 |
| SRR9715739 | Root | 0.818 |
| SRR9715742 | Root | 2.308 |
| SRR9715743 | Root | 1.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.110 |
| SRR8749028 | MeJA induced 9h | 8.966 |
| SRR8749029 | MeJA induced 9h | 8.825 |
| SRR8749030 | Uninduced | 14.578 |
| SRR8749031 | Uninduced | 23.698 |
| SRR8749032 | Uninduced | 8.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.942 |
| SRR8400027 | Control - Root | 16.993 |