Gene detail

Gene detail information of Glyur000036s00004660

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G46500.2	phosphoinositide 4-kinase gamma 4
NR	XP_003524436.1	PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Glycine max]
Swissprot	tr\|Q9ZPY9\|P4KG4_ARATH	Phosphatidylinositol 4-kinase gamma 4
trEMBL	tr\|I1K689\|I1K689_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G36810.1}

Sequence

Transcript Sequence

>Glyur000036s00004660.1
CTACAATTCAATACTACTACCGTTCTTTCTCTGTTCATTCTTTGCAATTAATTAATTGTCTCCTACTCTCTCTTCTTCAGCATCAACACACGTTTATCGGAACAGAGAAAAATTCGGCCCCTCACTGGTTGTTGGTGTGGCAATGGCCAACACAGACATCATTATCGGAAAATGCTACGATCTGAATCGCCCCAAATTCATCGCCATTTATAAGCCCTTGTCGCTCCCACATTCCCCTTTGGTTCTTTCCATTCGGTAAGAATCCCCTCTCGCTCGCTTCCACTCGCTCCACCATTCTTTCGAGAGACACATTATTGCACCTCCCATCATCATTTTCAGACCGCATATTCATCAAAAAAATNCCTACCCCAAAACAAAAACAATACAACGCAATCCAATTACTACTAGGTAGCACCTAACAATCCCTTTCTGGGTAGTTCAGCTTCTCGTCAAAATCATTTCTTTTTCATTTCTTATTCTCCATTAGATTAGATTTCATTTTTGGGTCTTCTCACTTTTTGTTAATGCATTATTTCTTCCTGTGACAGTAATTAATTTCATGTAAGGCAATCAAGTAGGCCTTTCTGTTGTTACCCCAAAAAAAAAAGAGAAAAAAAAATTAGTGATTGGACATTGAAAGATGTCGGTTGCTGATTTTGCTTTGAGTTCGATTTGCAAAGAGACGGTATATTGGGAGGGTCAACCGGGACATTGCTCCGGCGAGCCAATCCTTATTTACCTCACCGTGGATGGTGCTGCGGTGACACCAATGCGTGTGTTGGAATCAGATTCCATTGCTTCTGTCAAACTCAGGATTCAGCAATGCAAAGGCTTCGTGGTGAAGAACCAGAAGCTTGTTTTTGGTGGCAGGGAACTTGCTCGCAATGACACACTCATCAAGGAGTATGGTGTCACCGATGGCAATGTTCTTCACCTTGTTCTTCGCCTCTCCGATCTTCTCTTCATCGTCGTGAGAACCGTTAGTGGGAAGGAATTCGAGTTCCACATTGATAGGCATAGAAATGTGGGGTACCTAAAGCAAAGGATTAGAAAAAAGAAAGANGAAGGTTTCATTGACCTTGAGGATCAAGAGCTTTTCTGCAATGATGAGAAGCTTGATGACCAGAGACTCTTCCATGACATATGCAAGGGTGATGCTGATGTGATTCATTTGATCATTAAGAAATCAGTTAAGGTTAGGGCCACACCTATTCTCAAGGATTTGACGCTTTCTGTTGAGGCATCAATACCAAGTGAGAGCAGTGCTCAAAGAGTACAACAAGAAGTAGGAAGAGAGAATAATAATAGGAGTACGAGTACTACCAAACAGATTCAGATAGCAAAGGTACCACCTGGGTTAGGTTTCTGGTTGGAACCAATTGTAGTGAATCCCAAGGTTAATTTTTTTCCTTTCCTTTGGGACATGATNAATTCCACACATGAGGGTTTGAAGAGAGGAAATGTTCCTATTAGGTCCTCTGAAGGGACAGGAGGGACTTACTTCATGCAGGATTCAAAGGGTCAGGAGCANGTTTCAGTTTTCAAGCCCATGGATGAGGAACCAATGGCTGTGAACAACCCAAGAGGCCTACCNAGTTCATCTAACGGTGAAGGCTTAAAGAGAGGTACAAGGGTGGGAGAAGGAGCNTTGAGGGAAGTAGCAGCATATGTGTTAGATCATCCAATGAGTGGGCCACGTTTGGTTTCAGGTGAAGCGATTGGCTTTTCTGGTGTTCCACCTACTGTTATGGTGCAGTGCGTACATGGAGAGTTTCACCACCCAAAAGGGTATGCTTGCTCATCAAAACATGTCAAGATTGGGTCACTACAGAAGTTCATGAAGAATGATGGTAGCTGTGAGGACATTGGACCTGGAGCCTTTCCTGTGGAGGAGGTGCATAAGATTACTGTGCTTGATATCAGATTGGCTAATGCAGACAGACATGCTGGGAATATATTGATCAGAAAGATGACAGGTGGCCAGATTAAGCTCATTCCTATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAACACGTCAGCCTTACTCTCCCGAGACAGTTGAATATATCAATTCTCTGGATGCTGAAAAAGACATACAACTTTTGAGATACTATGGATGGGATATTCCACTTGAGTGTGCAAGAACACTTCGCATTTCCACCATGCTGCTGAAGAAAGGGGTTAAGAGAGGTCTCACTCCCTATGCAATTGGAAGCATCATGTGTCGAGAAAATTTGAACAAGGAATCTGTAATTGAGGAGATTATAAGTGAGGCCCAAAACTCCTTGCTTCCTGGCATGGAGGAATCAGCATTTCTTGAATCCGTATCCCAAATCATGGATTCCCACCTTGATAAGCTTGCAAAATAGACTCTTCTTGTGTTCTTTTTTCTGATTTAATATAGGTGATATTTGTATGTAATGTAATGTAATTCAGTGAGTGACTATAGTCCATTTTTGGATGGACTGCAGGTTGCACAATATGTGATGATGGCTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00036	359174	362321	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0016773 phosphotransferase activity, alcohol group as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000036s00004660.1	PF00240.18	ubiquitin	41	103	5.90E-16
Glyur000036s00004660.1	PF00454.22	PI3_PI4_kinase	284	543	6.40E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.304
SRR1783600	control	3.219
SRR1783602	moderate drought stress	0.791
SRR1811619	moderate drought stress	0.778

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.668
DRR006520	Root Summer glycyrrhizin high producing strain	3.744
DRR006521	Root Winter glycyrrhizin high producing strain	0.087
DRR006522	Root Winter glycyrrhizin high producing strain	0.085
DRR006523	Root Summer glycyrrhizin low producing strain	2.522
DRR006524	Root Summer glycyrrhizin low producing strain	2.434
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.660
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.622

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.211
SRR2868004	Drought Stress (root)	3.113
SRR2967015	Control (root)	3.079

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.976
SRR9715740	Leaf	0.196
SRR9715741	Leaf	0.235
SRR9715739	Root	3.133
SRR9715742	Root	5.864
SRR9715743	Root	4.962

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.857
SRR8749028	MeJA induced 9h	1.598
SRR8749029	MeJA induced 9h	0.941
SRR8749030	Uninduced	1.281
SRR8749031	Uninduced	0.633
SRR8749032	Uninduced	0.815

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.181
SRR8400027	Control - Root	10.507