Gene detail information of Glyur000036s00004657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10955.2 | 5.00E-117 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004503613.1 | 0 | PREDICTED: GDSL esterase/lipase At4g10955-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q680C0|GDL62_ARATH | 3.00E-145 | GDSL esterase/lipase At4g10955 |
| trEMBL | tr|A0A072TUX4|A0A072TUX4_MEDTR | 0 | Triacylglycerol lipase {ECO:0000313|EMBL:KEH21237.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 350124 | 351074 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004657.1 | PF01764.20 | Lipase_3 | 114 | 168 | 5.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.471 |
| SRR1783600 | control | 16.597 |
| SRR1783602 | moderate drought stress | 21.462 |
| SRR1811619 | moderate drought stress | 21.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.939 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.272 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.852 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.357 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.062 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.197 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.123 |
| SRR2868004 | Drought Stress (root) | 29.213 |
| SRR2967015 | Control (root) | 30.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.503 |
| SRR9715740 | Leaf | 5.403 |
| SRR9715741 | Leaf | 6.023 |
| SRR9715739 | Root | 4.805 |
| SRR9715742 | Root | 6.552 |
| SRR9715743 | Root | 6.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 69.257 |
| SRR8749028 | MeJA induced 9h | 48.806 |
| SRR8749029 | MeJA induced 9h | 45.664 |
| SRR8749030 | Uninduced | 26.540 |
| SRR8749031 | Uninduced | 35.041 |
| SRR8749032 | Uninduced | 29.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.884 |
| SRR8400027 | Control - Root | 41.508 |