Gene detail information of Glyur000036s00004649 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23885.1 | 2.00E-13 | |
| NR | AFK36049.1 | 1.15E-37 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S707|I3S707_LOTJA | 4.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:AFK36049.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 300036 | 301532 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.279 |
| SRR1783600 | control | 3.322 |
| SRR1783602 | moderate drought stress | 2.761 |
| SRR1811619 | moderate drought stress | 1.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.379 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.202 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.791 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.715 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.782 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 102.083 |
| SRR2868004 | Drought Stress (root) | 110.701 |
| SRR2967015 | Control (root) | 91.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.662 |
| SRR9715740 | Leaf | 42.086 |
| SRR9715741 | Leaf | 52.304 |
| SRR9715739 | Root | 37.271 |
| SRR9715742 | Root | 37.741 |
| SRR9715743 | Root | 31.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.728 |
| SRR8749028 | MeJA induced 9h | 12.711 |
| SRR8749029 | MeJA induced 9h | 28.111 |
| SRR8749030 | Uninduced | 23.359 |
| SRR8749031 | Uninduced | 20.177 |
| SRR8749032 | Uninduced | 22.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 92.232 |
| SRR8400027 | Control - Root | 101.664 |