Gene detail information of Glyur000036s00004639 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004503634.1 | 2.19E-28 | PREDICTED: uncharacterized protein LOC101502259 [Cicer arietinum] |
| trEMBL | tr|C6SW29|C6SW29_SOYBN | 1.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36963.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 227821 | 228438 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 568.249 |
| SRR1783600 | control | 590.062 |
| SRR1783602 | moderate drought stress | 822.730 |
| SRR1811619 | moderate drought stress | 847.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 714.687 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 699.973 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.880 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.383 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 894.751 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 911.406 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 808.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 810.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 156.143 |
| SRR2868004 | Drought Stress (root) | 135.841 |
| SRR2967015 | Control (root) | 213.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 96.740 |
| SRR9715740 | Leaf | 95.133 |
| SRR9715741 | Leaf | 63.837 |
| SRR9715739 | Root | 11.049 |
| SRR9715742 | Root | 195.315 |
| SRR9715743 | Root | 139.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.339 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.507 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 120.260 |
| SRR8400027 | Control - Root | 138.168 |