Gene detail

Gene detail information of Glyur000036s00004637

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64355.1	2.00E-45
NR	XP_004503635.1	1.82E-87	PREDICTED: uncharacterized protein LOC101502890 [Cicer arietinum]
trEMBL	tr\|A0A072TUK3\|A0A072TUK3_MEDTR	3.00E-87	Transmembrane protein, putative {ECO:0000313\|EMBL:KEH21204.1}

Sequence

Transcript Sequence

>Glyur000036s00004637.1
TGGGGTGTATGTCTATAATCTCAAGGTGTATTTACCAATTTCCAAAAAAATCTCACTAGGACAGTGATCGTCGTGTCATTGTGTTAACCGATGGCGAGCCCAACAAGACTGATTTTAAGCTAGTTGGTAATTGGGCTCTACTGGCCCATCCCAGCCCGCTTCGTGAATAGATTGAGAAATTGATGAACGGTTCCAATGCGGCGTCAAGAGATGAGATAGAATCATAGAAGTGGCGAATGAATTTGCAGAAATAGAATGGCAGCTACTACCATTAATTTGCCCCTTCTGTCCCTCTGTAAATCCCCCAACTATGTTAACAACCCTTCAACAAGCTTTTTGCAACGCGATTATGCGGGCAGCGTCAGAGGAAGCAGCGAATTGAAGAGTTACTACAGCAGAAAGAGAAAGAGAGCAGTGATCGTGTGTGGGTTGCCATTGGGCGTCGATCCATGGGCACCCACCATTGACTCCCAGAGTGTCGCTCCCCAGCTATTTGCGCTTTCCTTGTTTCCCTACATCGGTTTCTTGTACTTCATTACCAAGTCCAAGACTTCCCCCAACCTCACCCTCTTTGGCTTCTACTTTTTGCTCGCCTTTGTTGGGGCCACAACAAAGTTGCATTATGGAACTTCTTTGTCCAACGTGGACTGGTTACATGGCGGGGCTGAGTCCCTTCTCACTCTCACCAATCTGTTCATTGTGCTGGGTCTGAGAGAGGGACTCAGAAAATCTGGAAATTCAGAGAAAAACGCACCCACTCCAAACCCGGGTTCGAAGGAGGAGAAGAAACGTGGGATGAAGGTTTGATATTTGGAGTCATTCTTACTATTACCATTTAGCAGTGTGGTATTATCATTTGCTCTATCGGTTCGGCTCAGATGTTGCTCCAAATTTTGGCTGGGATTTATAATCATTGCCTTAAAAATCTCTAACTAATCGTTGCAGCCTGTGGGATATTTTGTAAATAAGATGGATATAAATGTTGGATTTTGTGTAATTTATCATTAATTGGAATGAAATCTTACAAAGCTTTGGTTAGTATATCCAATTTTGATCGCAATTTTTGGTCTGTTCCATTACATGTTACATGAATAACGACTTGCCCTTCAATAATGATATAAAAGCTATCTTTTAATATTGATCCTTTTTTGGATGATGTAGTTAAATTATGTAACTTAATTCTCTTTGGTTAATTGCTCTCATTATTATGACTGGCATCCTCTTATACTAAAAATGTAAGTCATGTAGGCTTTACCAATGCAAATTTGGGGCACCTTCTTATTTGAAAGTAAATACTGCTAAACAGTGCTAAAATTGTAATTCTAATATTAACTACAAGGACGTTTATAAATAGCACTAAGCTATCATTGCTGATTCGTTGTTCTACAATTCTGCTACTTTCTGAAGTTGTCCTATTTTAGTATAACTTCATACACATAATATTCAAACATGATTTTCCATGTTATTTGATCCATGTAGCCTACCTTACTCACTGAAAAAGGCTTCNGTTGTTGATGATGTTGTTTATACTCCTAATATTCCATTTATTCTTAAGTACACTTAGGAGAAAAAGCCTGGAGTATTGAAAGGGAAATTCGGATCAATTTCCACTGGATCAAGTGAGAAATTGAATTCNGGAATTGGAGAATTGGTGGCTGATGTGTTGGTGGAAATTATCTCAGTAATATCAGATTCCGAACGAGGCTTGTTATAGATCCCATCAAACCCATTCATGTGGAAAGTTGGAGATGAGAAATAGTTTGATTCTGGCGTTGTTGGAGATACATATTGTGTTTGGAAAAGGCTGCTCAAGAAGGAATCATTCTCGAAGGCTGAAGGAATCAAGCTGTTGTTTTCTTGTGTCGTCGTGCATCCAAATGAAGTGGAAGGGAAAGTGAAAGGACATGCCATTTCTTCATTTCCCAGATTATCCGCTCTGACAGTCAAGGTGTTTCTGAACTTTGTAAAGCTTTCTTGTGACGGTTGTGCATGGCGAATATCATTATTATGACGGTCCGGTTTCTCTTGTTTGCCCGGTGACTTAAGTGGCAGAACAGCATTGCTTCCCTGAGAACAGGTATGCTTTCCTTTGTANGTTATGTCAAATATTGTGGGATCTTCATCTGATCTCTGTACTTGCTTCGTGGCCCAGCAGTTCTGTGTGTTCCGGAAGGTGCATCTATAGTAACTTCTGCAAATGTCAAAATGGGTTGTTAGTGAGATGCCCACACAGGTAAAGGCAATTTTTTACACTTAAGAATTCTTGTGATTCTTTTCTACTGCAGGATAGTGGTGGAGTCCTCTCACCTAGGATATTTCGCACCGAGGATGTCTTTCTGACCATATTTTCTCCAGTTGTAGCCATCGTCATGTGATCCTTCAAGGCCACTCTCAAAGCCCACTCTTACCTGATCCGTCCATTTAGGCACAATCTTTCTGAAACCAATTTCAGACAAACATATTGTTGTTATTAGGAGCTTTAGGAGGATAACCAGGCATAGCTGGTATTTCTGTGGCAGAAAACTGATACCAAGTCTGTCTACTAAAACTCACCTTTTCTTTGAATCGTGTTTAATCTCCTGGTGATCTTGGATGCCCCCATCAACGTCGTCGCTCAGTGGAGGGGACTCTGGTAACAAGGTTACCGCTCGGTTCATGGTCTGCAACTTGGAAGTTGATTCATTCCATTTTAGAATTTGTAGAGCCTTTTCATAAGAAGATAGTATCATCTGCACCTGCAAATCCCTTGTGTCAGCAGGATATGGTGTCCTCAAATCTTCCTTCAATCTTCTTGCCACCTCCATTCCCTGAATTAGCTCATTGATGAGTGTGCTGTGCTCCCAGCTCCATTCATTCTCCATTTTGTATTGTCTATCACCTTAGTAATTATTAAGGATGTTGATGCTTGATATCTATTTCATGCCCAAGAGCATCACTTCTACTTTAGGAGACCCTGATGAAGTATAGTAAGCTATGAGCATGGACGTACCCAGAACAAGATTTGAAATTTCAAATTGGATTTTCTTTTTCGGTTGAATGGTTTGCTGTTGGAGAAGACAGAAGAGAGAGGGAGTGAGGCTGAAGGAGCAAATTTTAGTGAGAGCTAAGTTTTTTGAATTTTTTTGCTGGGTGAAGGAATGAGAGGCCTTTGTATTTAAAGGGTACGCACACACTTTGGGGGTTTTGAGTGGCAAATAAGGGAGCGAAGGAGAGGAGTATTGGAGGGTTCAAAGTCCAAGTTTGACTGAGAAAGCGAGTTTTTCAGCTAAGACTAGGATCGAGTCAGTGAACAGTGACAAATAGAATGCCTGACCGAGTCCACTTCACCTCGATAAGTTATTATTGGNTAATGATAGGCCCATGTTCTTCCAACGCATAATTATATAGACGATTAAGAATGTCAATATTGAAGAGAGGAGGGGGGCTTGAGATGAGAATTTTCAAATATCATTCCGCGTGGTCGCTTTTTGGTCCCTTTTAGTATCATTACTTCACTTATACAGTTAAACAAGACTGCTTACATGACTTATGGTTGTTGCCATCTACCAATTTTCTTGGTTGATACTTTATATGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00036	220840	224658	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000036s00004637.1	PF12159.3	DUF3593	77	158	8.00E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.845
SRR1783600	control	7.784
SRR1783602	moderate drought stress	6.331
SRR1811619	moderate drought stress	6.266

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	81.495
DRR006520	Root Summer glycyrrhizin high producing strain	80.450
DRR006521	Root Winter glycyrrhizin high producing strain	2.817
DRR006522	Root Winter glycyrrhizin high producing strain	2.694
DRR006523	Root Summer glycyrrhizin low producing strain	133.628
DRR006524	Root Summer glycyrrhizin low producing strain	126.859
DRR006525	Leaf Summer glycyrrhizin high producing strain	59.266
DRR006526	Leaf Summer glycyrrhizin high producing strain	58.256

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.212
SRR2868004	Drought Stress (root)	25.526
SRR2967015	Control (root)	41.209

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	186.450
SRR9715740	Leaf	147.935
SRR9715741	Leaf	167.682
SRR9715739	Root	14.741
SRR9715742	Root	64.327
SRR9715743	Root	54.531

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	36.030
SRR8749028	MeJA induced 9h	14.458
SRR8749029	MeJA induced 9h	14.692
SRR8749030	Uninduced	76.927
SRR8749031	Uninduced	20.146
SRR8749032	Uninduced	23.438

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.872
SRR8400027	Control - Root	39.098