Gene detail information of Glyur000036s00004632 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41800.1 | 2.00E-135 | Transmembrane amino acid transporter family protein |
| NR | KHM99911.1 | 0 | Lysine histidine transporter 1 [Glycine soja] |
| Swissprot | tr|Q8L4X4|GAT2_ARATH | 6.00E-180 | Probable GABA transporter 2 |
| trEMBL | tr|I1K6A7|I1K6A7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G37000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 201284 | 202958 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004632.1 | PF01490.13 | Aa_trans | 8 | 298 | 2.40E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.136 |
| SRR1783600 | control | 3.027 |
| SRR1783602 | moderate drought stress | 5.209 |
| SRR1811619 | moderate drought stress | 5.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.660 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.671 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.569 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.434 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.548 |
| SRR2868004 | Drought Stress (root) | 4.410 |
| SRR2967015 | Control (root) | 4.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.841 |
| SRR9715740 | Leaf | 3.913 |
| SRR9715741 | Leaf | 4.474 |
| SRR9715739 | Root | 2.957 |
| SRR9715742 | Root | 8.640 |
| SRR9715743 | Root | 7.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.656 |
| SRR8749028 | MeJA induced 9h | 4.250 |
| SRR8749029 | MeJA induced 9h | 3.247 |
| SRR8749030 | Uninduced | 4.334 |
| SRR8749031 | Uninduced | 2.796 |
| SRR8749032 | Uninduced | 1.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.225 |
| SRR8400027 | Control - Root | 10.132 |