Gene detail

Gene detail information of Glyur000036s00004628

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G41790.1	2.00E-63	COP1-interactive protein 1
NR	XP_007160143.1	0	hypothetical protein PHAVU_002G296300g [Phaseolus vulgaris]
trEMBL	tr\|V7CPM7\|V7CPM7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW32137.1}

Sequence

Transcript Sequence

>Glyur000036s00004628.1
ATGGAGCGCGCGGGGATAATACCGTCGTTTTCCTCCCGCGTGTTTCTTAATCAAATTGGTTTGGTAGATGTCAAGTTCCATTCTCAGGATGAACGATTAGGAGCGCTATGTTTGCGTACTCCACCTCCACGATTCCTAGTCATTTGTGGAGACAACAGAGAGTTCCTTGATCGGCATTTCCTTCTAAATATGATAAATAACCAGTCAGGGGAACCAATCAAGACCTTTGAAAGTCTAATTGATTCCGAAAATGCTGAAGAACTCAAAGGGACCAAAACAGATATTGAAAACAACATCACAAAAATCCTGAAGCTTATTAACAACGGAAACCAAAGCAAAAAAGATGGGAACCCCAAACGTTCTATAAAAGANACAGAACTTGTCGGACTCATTGAGGACTTGAACAAGCAGTACGAGTCACTTTATGCAGTGTATGATCGTGCTATTGGGAAAGTAGTTTCTCGCAGAAGAAATAGTAGGGCCTCAGTGTCTTCCTCAGACTCAGAGTACTTTTCCTCAGAGGAAATAGATGGTAATAAGAGAAGGTCAGAGAAAGAACATCAAAATATATCTGATACCCTTAAGCAGGAACCTGATAGAGGTGATAATACAGAGGTGATAGAAGCATCAGCTGAGGCAACAGAGTCTGAGGGACAATTAAATTCACTAATGAAAGAGATGGAGAGCTTGAGCCAGCAGAAAAGGAATCTAGAACTTCAAGTTGAAAGCCAAGCAAATGAGGTTAAACAACTAAGCGTAAAGAATACTGAGCTGCAAGACCAAGTCACGAGGCTTGAATCGTTGTTGAAAGAGATACAAGGTCTGGTATCTAATCTGGAGGAGAAACTCAGTAACAATGAGGATCAGGCAAATTCCGATGTTGTAAAATTGATGGCACAAATCAATGAGCTTGAACGGGAGGCCAAATCTCTGCGGACCCAGAAAGATGAGATGGAAGGAAAAGTAATCTGTGATAAAAATGAAGCCTCGACCCAAAGAGAGGACTTGATGGAGCAGCAGCTCAACGTTATGCAGCAAAAGTTGGATTCTCTGGGGAATCAGAACAAAGAACTAGAAGCTCAGATGGAAGGAAAGAGGGAAGAAATATCCCAATACGTGATTCAGATAGAAAATCTGAAGGAGAGTTTAGCTGAAAAGAGATCAACTGAACAGACTATGATGGAAGAGAAAGAGGGTTTTCTTGCGAGGATAAAGGACCTGGAACTAGAATTGGAAACTCGAAGCAACCAGAAAAACGAGTTGGAGGAGCACTTGAGAGATACAGGTTATGAGAATAAACAGCTGGTGAGTGAAAACAAGGCCCTGCAGGACAGAAACCATGAACTGAAAGCAGCGATGACAGAGAAAGGGGAAGAGATCTCTGACTTTTTGAGGGAACACGAGAGCAACCAGAAAAATGGAGCTTCTATGGAGGCGATGGCTTTAAAAGCAGAAGTTAATGTCATGAGGCTAGAGTTGGACACTTTGCATGAACAGAAAACCAAGTTGGAGCTCCAAAACGACCGAAACCAGAAGGAATATGAAGAGAGCCTATCAAAGATGGAAAATTTGAACACCAANTTGGCTACCCAGATAGCTGATCAGGCTGCAACCATTGAACGAATAAGTGCGGAGCAAAAACAAGCCACAATCATGTCGAATAAGTTGTTATTGAATCAGCGATTGGCAGAAAGGAAGATGGAAGAATTGGCAGAAAAGTTCCGGAAGAAAATGGAAGACAATATCCGCTTGTTGCACCAGAGGATCCACGTGGCAGAACAGCTGAACAATGAGAACAAAAACAGTTGCAAGATTACAAAGCAAAGGTATGAGCAAGAGAACAAGATCCTCGGAGAGAAAGTTGCTTATTATGAAGAGGAACTAAGGACCCTTAAAGAGGGTGACGGTGCTGCTGCTGCCACACCCTATGATCCACAGTGGTTTGAAATTGAATTGACTGCTCTGAATGGATTATTAGATGTAGCAGTTACAAATGTTGAGGAACACAGAGAGTATGTCCTGAACCGTGTCTCTGGAATGCTGTGTGAGGTTCAGTTTGCGAAGGATTGGATAAAGAAAATGAATGGGGAGATGAAACAACTGCAAGACAATGTGGATTGCCTTNAGGCGTCACTGAGTGAAAAACAAGAGCAGGAGTTGTTGCTGAGAGAGAAGGTGTGGGAATTAGANGCAAATGTGAGCAAAGGAGGAGGAGAGAAGCTGAACTTAACCAAAGCAGTGAGCCAGCTTGAGAAGAAAGTGGNGAAGTTGGAGAAGAAACTGAAGGAGAAGGAGGAGGACTTGGTTAGTCTTGGGGAGAAAAAGAGAGAAGCAATAAGGCAACTCTGTTTAGTTGTTGATTATCATCGCGACCGTTGTAACTATCTAATGAATTTGGTCACAAATATGAGGATGAAGAGAAGCGATGCCGTCATGAACGTCGCTCTGTCTCTAACTTTTGATGGGATTTACTACAACCCAAAAACAANTCTCAATCTCATCAACGAGGAAAGCAGCTGCTATTTTGTTCTTGGAACTCAACAGATTCAGAAGAGAAGAGTTGAAGGAAAACTGAAACTGTTATATCTCAGCCTCAGATCAGTAGAGAAGATGGTGAAACATCGCTTGAGAGAGTCTATGAAATCGTTGTTTGGTAGTCACATTGACCCTGATGAAGAAGAGCAGCTCCAGCAAGCTAAAACAGAAATTGAAGACAAAGTGAAAAGGATATTGAAACTTATTAAAGATGACAACCTTGAGGAGGATGATACCCCAGTAGAACTTTCGAAGAAGGAACCACTTGTTGAATTGATTGAGGATTTCCACAATCAATACCAATCGCTTTATGCACGATATGATCATCTAACAGGCGAGTTAAAGAAAAAGATCAAGGGCAAGCGAGAAAAGGGAAGTTCTTCATCCAGCTCTGACTCAGATTCGGATTACTCTTCAAAGGGAAAAGACAGCAAAAATGGAAATCTGGACAATGAATTTCAAAATATAATTGATGGATTAAAGCAAGAGCTTGAAATGGCGCATATGGAAGTTGCTGAATTAAATCGGAAGTTGACAATTACACATGAAGAGAAGGAGGATATAAATTCAAAATATCTAGCAGCACTGAGCAAGATACAAGAAGCAGACAAAATTAACATGGATTTGAAAACTGATGCTGAAGCATTAGGCATTCAAGGATCAAAACTTTTGGTTGAGAATGCTGAACTAAGCAAGCAACTGGACATTACTGGTAAAATAGAAGCTGAACTGAGTCAAAGACTAGAAGATTTGAAGTCAGAAAAAGATAGTTTGACCATGGAGAAAGAGACAGCTCTACAACAGATTGACGAGGAAAAGAAGATTACAGATGGTCTGAGAACCCTCACTGATCAATTGAAAGATGAGAAATTAGTGCTTGGGAAAGAATTACAAGGAGTTACAGATGAACTTTTCATTCTGAAGCAGCAGTTGCAACATGCAGAACAGCAAATAACAAATATCAGCCACANTCTGAAAGTCACCAAGGAAGAAAATGAATCATTAAAAGCGGAACTTTCAAAGGTTTCAAATGAGGTTCAGCTGGCTCAGAACAGAATGCAAGAGTTTGTAGCTGAATCAAGTCAGCTAAAGGAGAAACTTGATGAGAGAGAAAGGGAAGTTTCAACCCTCACTCAGACGCATGAAGGGTATCAGAATGAGTCTTCAAATCAAATCAGGGAACTGGAGGCACAAATCACAAACCTGGAGCTGGAATTAGAATCACTGCAAAACCGGAAAAGAGACATGGCGGAGCAAATTACAAGCCACACCACTGAAGCAAGGGAACTGGGAGAACACAATTTAGGGCTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGATATCATGAAGAAACTAAAAGAAAATGAGAATGACTCATCTTCTAAAATATCAGANTTGACATCTCAGATGAACAATCTGCTGGCTGATATAGGCATATTACGTGCTCAGAAAAATGAACTGGAAGAGCAGATAATTTTTAAAAGTAATGAAGCATCAACTCAAGTTGAAAGCATTACAAATGAGGTGAATGTGTTGCAGCAGGAAGTGGAGTCCCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAGTCCGAGAAAATTCTGAGTGTATGATTCAAATTCAAACTCTGAAAGAGGAGGAGGTTGACAGAAAAACCCTAGAACATGAGAGACTTCTGGAAGACAGAGAAAATCTAACCATGCAGATAAGGAATCTAGAATTAGAGATGAGCACTATAAAGAGCAGAAAGAGTGAAGATGAAGAGCTAATAAAGGCTAACAGCCATGAGATCAGTCATCTGGCACAGGAGAAGTTGGAGCTATGTGGCAAAATAGAAGAATTAGAGAAAAGATCAGCAGAGAGAGAATCAGAGTTCTCTGTTCTCCAGGATAAACTTAATAAGGCAGAGGAAGAGGGCTCAGCTCAAATATTGGCCTTCAGTGAGCAAATTAAGAATCTTCAACATGATTTGGTTACCCTGCAGAATGAGAAACAGGAATTAGCACAGCAGTGCGAAAAGCTGAAGTTGGAGTCATCTCTCACAGGAGAAGTTGGAGCTATGTGGAAAATAGAAGAATTAGAGAAAAGATCAGCAGAGAGAGAATCAGAGTTCTCTGTTCTCCAGGATAAACTTAATAAGGCAGAGGAAGAGGGCTCAGCTCAAATATTGGCCTTCAGTGAGCAAATTAAGAATCTTCAACATGATTTGGTTTCCCTGCAGAATGAGAAACAGGAATTAGCACAGCAGTGCGAAAAGCTGAAGTTGGAGGTGGATTCCATACACAGCCAGAAGAGTGAACTTGAAGAGCATATAAGGGCCCACAGCCTTGAGGTCAGTCATCTCTCACATGAGAGGTTGGAGCTATGTGAGAAAATAGCAGAATTGGGAAAAGATCAGCAGAGAGGGAATCGGAGTTCTCTGTTCTCCAGGATAAACTTAGCAGAGGAAGAGGGTTCAGCTCAAATATTGGCCTTCAGTGAGCAAATTAAGAATCTTCAACATGATTTGGTTTCCCTGCAGAATGAGAAACAGGAATTAGCACAGCAGGGTGAAAAGCTGAAGTTGGAGGTGGATTCCATACAGAGCCAGAAGAGTGAAGTTGAAGAGCAAATAAGAGTTAAAGATCACGAGAATAATGAGCTGAGAGAGGAAATTTTGGGATTTCAGGGAACAATTACTGCGCTGGAGAAAACATTAGCTGAGAAAGAGGCAGAGTTATCCACTTTACAGGAAAAGCTTCATGAAAAAGAGAATGAAGCTTCAGGGAAAATAATTGCCCTCACGGCCCAAGTTGATAATCTGCAAGAAGACTTGCTTTCCTTGCAGAAAACGAAAGAAGAATTGGAGCTTCACTCTGAAAAAACCAGAGGAGAACATGCAGAGAGCCTTATAATGGTTGACAAAGAAAAGAATGAATTAGCCAACAAAAATATGGATCTTCAGAGAACATTGGAAGAACGAGAAGATGCATATCAGAAGTTGAATGAAGAATATAAACAAATTGATAGTTGGTTTAAGGAATGCANGGTCAAACTTGAAGTTGCAGAGAAGAAGATTGAAGAAATGGCAGAAGAGTTTCATGAAGGCATTGGGTCGAAAGATCAGATGGTAGCTGATTTGGAGCATACAGTAGAAGACCTGAAAAGAGACCTGGAAGAGAAAGGAGATGAAATCAGTACTTTGCTTGAGAATGTCCGGAACATTGAGGTAAAGCTTCGTCTGTCAAACCAAAAGCTCCGGGTCACAGAACAATTGCTAAGTGAGAAGGAAGAGAGCTTCAGAAAGACAGAAGAAAAGTTTCAGCAAGATCAGAAAACACTTGAAGACAGGATTGCTACTTTGTCGGCAACAATTACTGCTAACAATGAAGCTTTTCATGAAATTATCACAAATATTAAAGTGTGTGTGGAAAGTGTGATAGCTGGCATAGATACTGTAAGCTGGAAATTTTCTGACGATTGTAAAAACTATGAGAATTGCATCTCAAACATCTCACATGAGCTTCAGGTTGCAAAAGACTGTGTTAGGGAGATGAATAGGGAAAAAGAGCAGTTAAAGAAAGAGAAAAACCGTTTGTTGGAGGAGCTGCAGGGTAAAAANGAACAGGAATTGACTCTGAGGGACAACGTTGAGAAGCTGGAGGCAAAGACAAGAAAGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTTGTTCAACTTAAGAAGACAGTTGGAGAACTAGAGAAAGTGATGAAAGAGAAAGAGGAAGGTATGCTGGACTTGGGGGAGGAAAAGAGAGAGGCCATTAGGCAGCTATGTTTGTGGATTGATTATCACCGCAGTCGTTATGACTCTCTCAGGGACATGATTATATCAAAGACTCGCAGTGGCCAGAGAGCAGCAATAACAACTCAAATTTATTAG

Protein Sequence

>Glyur000036s00004628.1
MERAGIIPSFSSRVFLNQIGLVDVKFHSQDERLGALCLRTPPPRFLVICGDNREFLDRHFLLNMINNQSGEPIKTFESLIDSENAEELKGTKTDIENNITKILKLINNGNQSKKDGNPKRSIKXTELVGLIEDLNKQYESLYAVYDRAIGKVVSRRRNSRASVSSSDSEYFSSEEIDGNKRRSEKEHQNISDTLKQEPDRGDNTEVIEASAEATESEGQLNSLMKEMESLSQQKRNLELQVESQANEVKQLSVKNTELQDQVTRLESLLKEIQGLVSNLEEKLSNNEDQANSDVVKLMAQINELEREAKSLRTQKDEMEGKVICDKNEASTQREDLMEQQLNVMQQKLDSLGNQNKELEAQMEGKREEISQYVIQIENLKESLAEKRSTEQTMMEEKEGFLARIKDLELELETRSNQKNELEEHLRDTGYENKQLVSENKALQDRNHELKAAMTEKGEEISDFLREHESNQKNGASMEAMALKAEVNVMRLELDTLHEQKTKLELQNDRNQKEYEESLSKMENLNTXLATQIADQAATIERISAEQKQATIMSNKLLLNQRLAERKMEELAEKFRKKMEDNIRLLHQRIHVAEQLNNENKNSCKITKQRYEQENKILGEKVAYYEEELRTLKEGDGAAAATPYDPQWFEIELTALNGLLDVAVTNVEEHREYVLNRVSGMLCEVQFAKDWIKKMNGEMKQLQDNVDCLXASLSEKQEQELLLREKVWELXANVSKGGGEKLNLTKAVSQLEKKVXKLEKKLKEKEEDLVSLGEKKREAIRQLCLVVDYHRDRCNYLMNLVTNMRMKRSDAVMNVALSLTFDGIYYNPKTXLNLINEESSCYFVLGTQQIQKRRVEGKLKLLYLSLRSVEKMVKHRLRESMKSLFGSHIDPDEEEQLQQAKTEIEDKVKRILKLIKDDNLEEDDTPVELSKKEPLVELIEDFHNQYQSLYARYDHLTGELKKKIKGKREKGSSSSSSDSDSDYSSKGKDSKNGNLDNEFQNIIDGLKQELEMAHMEVAELNRKLTITHEEKEDINSKYLAALSKIQEADKINMDLKTDAEALGIQGSKLLVENAELSKQLDITGKIEAELSQRLEDLKSEKDSLTMEKETALQQIDEEKKITDGLRTLTDQLKDEKLVLGKELQGVTDELFILKQQLQHAEQQITNISHXLKVTKEENESLKAELSKVSNEVQLAQNRMQEFVAESSQLKEKLDEREREVSTLTQTHEGYQNESSNQIRELEAQITNLELELESLQNRKRDMAEQITSHTTEARELGEHNLGLRNQISELEMKSKEREEELSDIMKKLKENENDSSSKISXLTSQMNNLLADIGILRAQKNELEEQIIFKSNEASTQVESITNEVNVLQQEVESLQHQKSDLEVQLVEKVRENSECMIQIQTLKEEEVDRKTLEHERLLEDRENLTMQIRNLELEMSTIKSRKSEDEELIKANSHEISHLAQEKLELCGKIEELEKRSAERESEFSVLQDKLNKAEEEGSAQILAFSEQIKNLQHDLVTLQNEKQELAQQCEKLKLESSLTGEVGAMWKIEELEKRSAERESEFSVLQDKLNKAEEEGSAQILAFSEQIKNLQHDLVSLQNEKQELAQQCEKLKLEVDSIHSQKSELEEHIRAHSLEVSHLSHERLELCEKIAELGKDQQRGNRSSLFSRINLAEEEGSAQILAFSEQIKNLQHDLVSLQNEKQELAQQGEKLKLEVDSIQSQKSEVEEQIRVKDHENNELREEILGFQGTITALEKTLAEKEAELSTLQEKLHEKENEASGKIIALTAQVDNLQEDLLSLQKTKEELELHSEKTRGEHAESLIMVDKEKNELANKNMDLQRTLEEREDAYQKLNEEYKQIDSWFKECXVKLEVAEKKIEEMAEEFHEGIGSKDQMVADLEHTVEDLKRDLEEKGDEISTLLENVRNIEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQKTLEDRIATLSATITANNEAFHEIITNIKVCVESVIAGIDTVSWKFSDDCKNYENCISNISHELQVAKDCVREMNREKEQLKKEKNRLLEELQGKXEQELTLRDNVEKLEAKTRKEESEKMNLTTTVVQLKKTVGELEKVMKEKEEGMLDLGEEKREAIRQLCLWIDYHRSRYDSLRDMIISKTRSGQRAAITTQIY

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00036	157404	176072	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000036s00004628.1	PF07765.7	KIP1	885	953	6.80E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.247
SRR1783600	control	9.300
SRR1783602	moderate drought stress	12.973
SRR1811619	moderate drought stress	12.890

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.257
DRR006520	Root Summer glycyrrhizin high producing strain	10.987
DRR006521	Root Winter glycyrrhizin high producing strain	8.426
DRR006522	Root Winter glycyrrhizin high producing strain	8.274
DRR006523	Root Summer glycyrrhizin low producing strain	18.856
DRR006524	Root Summer glycyrrhizin low producing strain	18.600
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.608
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.546

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.144
SRR2868004	Drought Stress (root)	28.153
SRR2967015	Control (root)	28.950

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.618
SRR9715740	Leaf	13.403
SRR9715741	Leaf	14.208
SRR9715739	Root	0.454
SRR9715742	Root	1.524
SRR9715743	Root	1.348

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.864
SRR8749028	MeJA induced 9h	15.899
SRR8749029	MeJA induced 9h	9.846
SRR8749030	Uninduced	15.781
SRR8749031	Uninduced	26.991
SRR8749032	Uninduced	11.491

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.109
SRR8400027	Control - Root	13.425