Gene detail information of Glyur000036s00004625 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23760.1 | 1.00E-12 | Cox19-like CHCH family protein |
| NR | XP_004503643.1 | 9.49E-22 | PREDICTED: uncharacterized protein LOC101505354 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7CS10|V7CS10_PHAVU | 1.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW32133.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 150596 | 153030 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.726 |
| SRR1783600 | control | 7.788 |
| SRR1783602 | moderate drought stress | 8.990 |
| SRR1811619 | moderate drought stress | 8.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.220 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.749 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 49.159 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.575 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.556 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.374 |
| SRR2868004 | Drought Stress (root) | 6.969 |
| SRR2967015 | Control (root) | 6.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.163 |
| SRR9715740 | Leaf | 11.409 |
| SRR9715741 | Leaf | 7.821 |
| SRR9715739 | Root | 4.469 |
| SRR9715742 | Root | 5.153 |
| SRR9715743 | Root | 3.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.010 |
| SRR8749028 | MeJA induced 9h | 71.057 |
| SRR8749029 | MeJA induced 9h | 180.835 |
| SRR8749030 | Uninduced | 37.429 |
| SRR8749031 | Uninduced | 70.207 |
| SRR8749032 | Uninduced | 111.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.793 |
| SRR8400027 | Control - Root | 9.665 |