Gene detail information of Glyur000036s00004616 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50810.1 | 2.00E-21 | translocase inner membrane subunit 8 |
| NR | XP_004503780.1 | 3.20E-46 | PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Cicer arietinum] |
| Swissprot | tr|Q9XGY4|TIM8_ARATH | 2.00E-27 | Mitochondrial import inner membrane translocase subunit TIM8 |
| trEMBL | tr|I1JXN3|I1JXN3_SOYBN | 5.00E-43 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 101693 | 104157 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004616.1 | PF02953.10 | zf-Tim10_DDP | 12 | 77 | 6.30E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.840 |
| SRR1783600 | control | 7.090 |
| SRR1783602 | moderate drought stress | 5.247 |
| SRR1811619 | moderate drought stress | 5.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.306 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.887 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.280 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.569 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.512 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.234 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.486 |
| SRR2868004 | Drought Stress (root) | 28.827 |
| SRR2967015 | Control (root) | 28.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.728 |
| SRR9715740 | Leaf | 18.107 |
| SRR9715741 | Leaf | 18.395 |
| SRR9715739 | Root | 8.928 |
| SRR9715742 | Root | 8.949 |
| SRR9715743 | Root | 8.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.653 |
| SRR8749028 | MeJA induced 9h | 11.620 |
| SRR8749029 | MeJA induced 9h | 14.322 |
| SRR8749030 | Uninduced | 8.193 |
| SRR8749031 | Uninduced | 4.501 |
| SRR8749032 | Uninduced | 6.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.590 |
| SRR8400027 | Control - Root | 23.456 |