Gene detail information of Glyur000036s00004612 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50790.1 | 3.00E-74 | Nodulin MtN3 family protein |
| NR | NP_001241307.1 | 7.20E-153 | uncharacterized protein LOC100810946 [Glycine max] |
| Swissprot | tr|Q2QR07|SWT13_ORYSJ | 8.00E-94 | Bidirectional sugar transporter SWEET13 |
| trEMBL | tr|C6TC24|C6TC24_SOYBN | 3.00E-153 | Sugar transporter SWEET {ECO:0000256|RuleBase:RU910715} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 73768 | 76436 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004612.1 | PF03083.11 | MtN3_slv | 10 | 97 | 1.30E-27 |
| Glyur000036s00004612.1 | PF03083.11 | MtN3_slv | 133 | 216 | 1.60E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.479 |
| SRR1783600 | control | 12.391 |
| SRR1783602 | moderate drought stress | 38.960 |
| SRR1811619 | moderate drought stress | 38.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 74.433 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 74.188 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.630 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.665 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 85.501 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 85.026 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 416.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 413.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.277 |
| SRR2868004 | Drought Stress (root) | 34.984 |
| SRR2967015 | Control (root) | 93.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 264.558 |
| SRR9715740 | Leaf | 402.790 |
| SRR9715741 | Leaf | 339.670 |
| SRR9715739 | Root | 3.538 |
| SRR9715742 | Root | 44.669 |
| SRR9715743 | Root | 33.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.904 |
| SRR8749028 | MeJA induced 9h | 3.943 |
| SRR8749029 | MeJA induced 9h | 6.217 |
| SRR8749030 | Uninduced | 0.488 |
| SRR8749031 | Uninduced | 1.172 |
| SRR8749032 | Uninduced | 7.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.028 |
| SRR8400027 | Control - Root | 31.267 |