Gene detail information of Glyur000036s00004606 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24970.1 | 0 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| NR | XP_003532495.1 | 0 | PREDICTED: uncharacterized protein LOC100816702 isoform X1 [Glycine max] |
| trEMBL | tr|I1KP55|I1KP55_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G01340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 24352 | 33441 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004606.1 | PF13589.1 | HATPase_c_3 | 233 | 348 | 2.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.534 |
| SRR1783600 | control | 2.604 |
| SRR1783602 | moderate drought stress | 3.042 |
| SRR1811619 | moderate drought stress | 3.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.583 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.485 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.323 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.360 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.484 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.208 |
| SRR2868004 | Drought Stress (root) | 10.315 |
| SRR2967015 | Control (root) | 9.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.628 |
| SRR9715740 | Leaf | 5.602 |
| SRR9715741 | Leaf | 7.379 |
| SRR9715739 | Root | 0.549 |
| SRR9715742 | Root | 3.829 |
| SRR9715743 | Root | 3.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.027 |
| SRR8749028 | MeJA induced 9h | 17.791 |
| SRR8749029 | MeJA induced 9h | 22.953 |
| SRR8749030 | Uninduced | 14.945 |
| SRR8749031 | Uninduced | 31.634 |
| SRR8749032 | Uninduced | 19.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.424 |
| SRR8400027 | Control - Root | 8.817 |