Gene detail information of Glyur000036s00004605 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50760.1 | 3.00E-17 | SAUR-like auxin-responsive protein family |
| NR | KEH20995.1 | 3.77E-40 | SAUR-like auxin-responsive family protein [Medicago truncatula] |
| Swissprot | tr|P32295|ARG7_VIGRR | 4.00E-12 | Indole-3-acetic acid-induced protein ARG7 |
| trEMBL | tr|A0A072U572|A0A072U572_MEDTR | 1.00E-40 | SAUR-like auxin-responsive family protein {ECO:0000313|EMBL:KEH20995.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 18776 | 19139 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004605.1 | PF02519.9 | Auxin_inducible | 32 | 108 | 2.10E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.068 |
| SRR1783602 | moderate drought stress | 0.111 |
| SRR1811619 | moderate drought stress | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.451 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.269 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.051 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.960 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.115 |
| SRR2868004 | Drought Stress (root) | 0.532 |
| SRR2967015 | Control (root) | 0.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.165 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.487 |
| SRR9715742 | Root | 2.662 |
| SRR9715743 | Root | 1.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.331 |
| SRR8749028 | MeJA induced 9h | 2.319 |
| SRR8749029 | MeJA induced 9h | 4.727 |
| SRR8749030 | Uninduced | 13.768 |
| SRR8749031 | Uninduced | 19.375 |
| SRR8749032 | Uninduced | 34.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.196 |
| SRR8400027 | Control - Root | 0.590 |