Gene detail information of Glyur000035s00005029 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17240.1 | 1.00E-38 | |
| NR | XP_004486334.1 | 1.11E-157 | PREDICTED: structural maintenance of chromosomes protein 4-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7IPB9|G7IPB9_MEDTR | 3.00E-153 | Uncharacterized protein {ECO:0000313|EMBL:AES64529.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 500561 | 503066 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.504 |
| SRR1783600 | control | 3.449 |
| SRR1783602 | moderate drought stress | 1.746 |
| SRR1811619 | moderate drought stress | 1.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.564 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.372 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.086 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.679 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.667 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.497 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.878 |
| SRR2868004 | Drought Stress (root) | 3.232 |
| SRR2967015 | Control (root) | 4.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.258 |
| SRR9715740 | Leaf | 0.094 |
| SRR9715741 | Leaf | 0.244 |
| SRR9715739 | Root | 1.766 |
| SRR9715742 | Root | 1.164 |
| SRR9715743 | Root | 1.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.836 |
| SRR8749028 | MeJA induced 9h | 7.274 |
| SRR8749029 | MeJA induced 9h | 6.849 |
| SRR8749030 | Uninduced | 3.785 |
| SRR8749031 | Uninduced | 1.831 |
| SRR8749032 | Uninduced | 1.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.103 |
| SRR8400027 | Control - Root | 4.889 |