Gene detail

Gene detail information of Glyur000035s00005002

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G55340.1	3.00E-58	MBOAT (membrane bound O-acyl transferase) family protein
NR	XP_004486217.1	0	PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Cicer arietinum]
COG	YP_006411928.1	4.00E-06	D-alanine export membrane protein [Alistipes finegoldii DSM 17242]
Swissprot	tr\|Q9SV07\|ASAT1_ARATH	2.00E-81	Acyl-CoA--sterol O-acyltransferase 1
trEMBL	tr\|I1KZZ3\|I1KZZ3_SOYBN	2.00E-179	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G01290.1}

Sequence

Transcript Sequence

>Glyur000035s00005002.1
ATGATGATGATGGATGGAGAAATCAACAATTTCATCATGGTATGGACCGTAGCAGCAGCAACAATGTGTTACTGCCACACAATTGGCAAGCTAATCTCACAAGGCACACCAAGACTCATAGCTCTCCTCCCAGCCATAGTCCTCCTCCTCCTCCTCCCTCTGCGCCTCACCTCCATTCACCTTGGTGGACCCTCTTCTTTCTTCCTCGGTTGGCTNTCCACCTTCAAGCTCCTCCTCTTTGCCTTCGGAAAGGGTCCCCTCNCNCCCAACCCTCCCCTCTCTTTACCTCACTTCGTCCCCCTCGCTCTCCTCCCCATCAAATTCCAACACCAAAACAACAATAACCCCACAAACCCNAAAACCCACCAAAATGGAAAAAACCACCACCCATCTCCCCAAATTACCAAAACGGACAACAATGTCAAATCCCCCCTCACCTATGCATATGCCACAACGGTTTTCATATTGGCCGCTCTAATTCCCCTCTATGGAAAGAAAGAACTTTTCCATCCAAAGTTCATTTTTTTCCTATACAGCCTCCACATGTACGCTGGTCTTGAATTCTTTTTCGCCTTGGCCTCCACTTTCACTGAAAAACTTCTCGGTGTTCAGCTAGAGCCACAGTTCGANAGGCCTTACCTATGCACCTCTCTGCAGGACTTTTGGGGGAAAAGGTGGAACCTCTCGGTGAANCGCGTACTACACCCCACCGTGTACGAGCCCGTGGTGGGTGCCTCGAGACGCGTGATTGGGAGGAAGTGGGCCCCACTTCCCGGCGTGCTTGCCACCTTCGCCGTGTCGGCGGTGATGCACGAGCTGATTTTCTACTACATCAAAAGGGAGGAGCGCACGTGGGAGGCGTGGGAACCCTCGTGGGATGCCACGTGCTTTTTTGTCTTACATGGGGTGTGTTTGGATCTTGAGGTTGCGCTCAAGAAGGCGCTCNCGGGGAGGTGGAGGTTGCCGAGGGCGGTGTCGTGGGTTCTTACGGTGGCGTTTGTGTTCTACACGACGTTGGGGCTGTTCGTGCCGGCGCTTGTGCGGTGTCGCGTTTATGAGAAGGCCACGAGAGAGTTGACTGCTTTGACCGAGTTTGGGAAGGATGTGTACCGTGTTGCCGGCGGGCTTGCGTTTTTTCACGTGAGAAGCGCATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00035	336614	337768	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000035s00005002.1	PF13813.1	MBOAT_2	206	299	7.50E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	68.060
SRR1783600	control	69.999
SRR1783602	moderate drought stress	53.044
SRR1811619	moderate drought stress	54.194

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.350
DRR006520	Root Summer glycyrrhizin high producing strain	41.929
DRR006521	Root Winter glycyrrhizin high producing strain	10.420
DRR006522	Root Winter glycyrrhizin high producing strain	9.984
DRR006523	Root Summer glycyrrhizin low producing strain	43.965
DRR006524	Root Summer glycyrrhizin low producing strain	44.472
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.483
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.404

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.095
SRR2868004	Drought Stress (root)	15.531
SRR2967015	Control (root)	16.417

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	42.631
SRR9715740	Leaf	28.365
SRR9715741	Leaf	46.159
SRR9715739	Root	195.382
SRR9715742	Root	82.625
SRR9715743	Root	101.831

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	38.009
SRR8749028	MeJA induced 9h	18.378
SRR8749029	MeJA induced 9h	14.895
SRR8749030	Uninduced	15.570
SRR8749031	Uninduced	1.896
SRR8749032	Uninduced	3.648

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.180
SRR8400027	Control - Root	31.949