Gene detail information of Glyur000035s00005000 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12060.1 | 9.00E-52 | BCL-2-associated athanogene 5 |
| NR | XP_003594216.1 | 3.42E-90 | hypothetical protein MTR_2g025690 [Medicago truncatula] |
| Swissprot | tr|O65373|BAG5_ARATH | 8.00E-66 | BAG family molecular chaperone regulator 5, mitochondrial (Precursor) |
| trEMBL | tr|Q2HT37|Q2HT37_MEDTR | 1.00E-90 | IQ calmodulin-binding region; Apoptosis regulator Bcl-2 protein, BAG {ECO:0000313|EMBL:ABD33007.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 333519 | 334722 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000035s00005000.1 | PF02179.11 | BAG | 68 | 140 | 3.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.677 |
| SRR1783600 | control | 61.816 |
| SRR1783602 | moderate drought stress | 50.279 |
| SRR1811619 | moderate drought stress | 48.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.697 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.297 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.209 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 48.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 69.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.890 |
| SRR2868004 | Drought Stress (root) | 16.985 |
| SRR2967015 | Control (root) | 22.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.873 |
| SRR9715740 | Leaf | 22.785 |
| SRR9715741 | Leaf | 18.591 |
| SRR9715739 | Root | 99.043 |
| SRR9715742 | Root | 73.457 |
| SRR9715743 | Root | 74.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.109 |
| SRR8749028 | MeJA induced 9h | 25.664 |
| SRR8749029 | MeJA induced 9h | 19.370 |
| SRR8749030 | Uninduced | 15.244 |
| SRR8749031 | Uninduced | 6.249 |
| SRR8749032 | Uninduced | 19.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.216 |
| SRR8400027 | Control - Root | 44.043 |