Gene detail information of Glyur000035s00004997 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27200.1 | 9.00E-15 | Cupredoxin superfamily protein |
| NR | XP_003546178.1 | 7.93E-79 | PREDICTED: early nodulin-like protein 2-like [Glycine max] |
| Swissprot | tr|Q9T076|ENL2_ARATH | 2.00E-15 | Early nodulin-like protein 2 (Precursor) |
| trEMBL | tr|I1MFM8|I1MFM8_SOYBN | 3.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G12080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 315467 | 317468 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000035s00004997.1 | PF02298.12 | Cu_bind_like | 48 | 125 | 8.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.037 |
| SRR1783600 | control | 28.257 |
| SRR1783602 | moderate drought stress | 26.435 |
| SRR1811619 | moderate drought stress | 26.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.996 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.975 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.889 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.984 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.741 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.023 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 67.300 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.436 |
| SRR2868004 | Drought Stress (root) | 7.147 |
| SRR2967015 | Control (root) | 5.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 54.705 |
| SRR9715740 | Leaf | 140.571 |
| SRR9715741 | Leaf | 37.921 |
| SRR9715739 | Root | 95.125 |
| SRR9715742 | Root | 45.897 |
| SRR9715743 | Root | 56.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.039 |
| SRR8749028 | MeJA induced 9h | 2.354 |
| SRR8749029 | MeJA induced 9h | 2.705 |
| SRR8749030 | Uninduced | 0.671 |
| SRR8749031 | Uninduced | 0.157 |
| SRR8749032 | Uninduced | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.143 |
| SRR8400027 | Control - Root | 35.803 |