Gene detail information of Glyur000035s00004984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22290.1 | 2.00E-131 | Ubiquitin-specific protease family C19-related protein |
| NR | XP_007147668.1 | 0 | hypothetical protein PHAVU_006G144300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FZ45|Y1686_ARATH | 7.00E-153 | Uncharacterized membrane protein At1g16860 |
| trEMBL | tr|V7BNX8|V7BNX8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW19662.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 228419 | 233072 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.447 |
| SRR1783600 | control | 15.446 |
| SRR1783602 | moderate drought stress | 24.120 |
| SRR1811619 | moderate drought stress | 24.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.030 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.515 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.601 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.583 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.224 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.548 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.389 |
| SRR2868004 | Drought Stress (root) | 16.828 |
| SRR2967015 | Control (root) | 23.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.403 |
| SRR9715740 | Leaf | 2.787 |
| SRR9715741 | Leaf | 3.993 |
| SRR9715739 | Root | 16.203 |
| SRR9715742 | Root | 19.190 |
| SRR9715743 | Root | 18.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.232 |
| SRR8749028 | MeJA induced 9h | 11.741 |
| SRR8749029 | MeJA induced 9h | 9.220 |
| SRR8749030 | Uninduced | 1.593 |
| SRR8749031 | Uninduced | 0.429 |
| SRR8749032 | Uninduced | 1.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.786 |
| SRR8400027 | Control - Root | 30.363 |