Gene detail information of Glyur000035s00004981 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05520.1 | 0 | EPS15 homology domain 2 |
| NR | XP_004486203.1 | 0 | PREDICTED: EH domain-containing protein 1-like [Cicer arietinum] |
| COG | YP_001528967.1 | 1.00E-26 | hypothetical protein Dole_1083 [Desulfococcus oleovorans Hxd3] |
| trEMBL | tr|I1MFL9|I1MFL9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G11970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 217243 | 221812 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000035s00004981.1 | PF12763.2 | EF-hand_4 | 8 | 75 | 3.10E-08 |
| Glyur000035s00004981.1 | PF00350.18 | Dynamin_N | 195 | 355 | 2.50E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.390 |
| SRR1783600 | control | 13.482 |
| SRR1783602 | moderate drought stress | 9.819 |
| SRR1811619 | moderate drought stress | 9.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.256 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.066 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.489 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.189 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.689 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.708 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.658 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.824 |
| SRR2868004 | Drought Stress (root) | 12.744 |
| SRR2967015 | Control (root) | 15.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.405 |
| SRR9715740 | Leaf | 3.473 |
| SRR9715741 | Leaf | 3.168 |
| SRR9715739 | Root | 3.117 |
| SRR9715742 | Root | 6.070 |
| SRR9715743 | Root | 4.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.801 |
| SRR8749028 | MeJA induced 9h | 25.978 |
| SRR8749029 | MeJA induced 9h | 17.970 |
| SRR8749030 | Uninduced | 4.770 |
| SRR8749031 | Uninduced | 3.173 |
| SRR8749032 | Uninduced | 2.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.387 |
| SRR8400027 | Control - Root | 26.754 |