Gene detail

Gene detail information of Glyur000035s00004957.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G21630.1	5.00E-179	chitin elicitor receptor kinase 1
NR	XP_004486184.1	0	PREDICTED: chitin elicitor receptor kinase 1-like [Cicer arietinum]
COG	YP_632759.1	5.00E-25	serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprot	tr\|A8R7E6\|CERK1_ARATH	0	Chitin elicitor receptor kinase 1 (Precursor)
trEMBL	tr\|K7MAT3\|K7MAT3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G11785.2}

Sequence

Transcript Sequence

>Glyur000035s00004957.1
ATGACCACATATCAAGTTTTCATAATTTTTCTTATGTTTTTGTTGTTGACTATAATTATGAGAATCGAGGGAAGCTGTTTCTCTGGCTGCAACCTTGCTCTGGCTTCCTACTACATATGGGAAGGCACAAACCTCACTTACATTAGCGAGTTGTTTGGGACACCAACCTCGGAGATCCTGAAATACAACCCGGGTGTGAAAAACCCTGACACCATTCAGAGCCAAACACGGATCAACGTGCCNTTCACGTGTGAGTGCCTCAACGGTGTCTTCCTTGGCCACACCTTCTCCTACACCACCCAATACGGCGACAACTACATTTCAGTTGCAAGGGTCGGTTACTCGAACCTCACAACAGAGGAGTGGGTGAGCAGGGTTAACAGTTACCCACCNAACGATATACCCGACAACGCGAAAATCAATGTAACCATTAACTGCTCCTGCGGAGACAGACACGTGTCCAAGGATTATGGGCTCTTTCTAACATACCCACTTCTCCCCGGTGACAACTTGCCGCNACTTGCGGCGGATTCCGGCGTGCCGGCGGAGCTGCTCCAGAGGTACAACCCCGCCTCAGATTTCAGTGCCGGGAATGGACTTGTGTTTCTGCCGGCNAAAGGGATATCCAGAGGAGCCATTGCTGGCATAGCTGTGGGAGGAGCTGTTGGGATCTTACTGTTGGCACTCCTTCTATATGTTGTGCTATATAGAAGAAAGAAAGTGGCTGAAGTAACCCTTCTCCCAGTCCCAGCTGGAGCATCTGAAGTTCAGTANAGTCAGCTCCAACATGGTTGTGGAAGCAACGTGGATAAGGCATCAGAATCTTCATCAATTGTTGCATCTCCAAGGTTGACAGGTATTACAGTGGACAAGTCTGTGGAGTTCTCATATGAGGAGCTGGCCAAGGCTACTGATGGCTTTAGCGAGGCTAATATAATTGGTCAAGGTGGCTTTGGATCTGTTTACTACNCCGAGCTTCGAAATGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAAAGAATTCCTTGCTGAACTAAAGGTTCTGACACATGTCCATCACTTGAACCTGGTGCGGTTAATAGGATATTGTGTTGAGGGCTCCTTGTTTTTGGTTTATGAGTACATTGAGAACGGCAATTTAAGTCAACATTTGCATGGNTCAGGGAGGGATCCNTTATCATGGCCAGCTAGAGTTCAAATTGCACTGGATTCAGCAAGAGGACTGGAATACATTCATGAGCATACAGTTCCTGTCTACATCCATCGAGACATTAAATCAGCAAACATTTTGATTGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTCTGACAAAATTGACTGAGTATGGTAGCAACTCATTACAAACGCGTCTTGTGGGGACATTTGGTTATATGCCTCCAGAATATGCACAGTATGGTGAAGTTTCTCCCAAGATAGACGTATATGCTTTTGGAGTTGTTCTCCTTGAGCTCGTATCTGGCAAGGAAGCTATTNTAAAGACAAACGAGCCTGAGAGTGAATCAAAAGGACTAGTTGCCCTGTTTGAAGAGNTTCTTGGTATGTCAGACCCAAAAGAAGATCTTTGCAAACTTGTGGACCCTAGGCTTGGTGACAACTACCCTCTTGACTCGATGTCTCAGCTTGCCAAAGCTTGTACACATGAAAATCCTCAACTTAGGCCAAGCATGAGATCAATTGTAGTTGCCTTAATGACGCTTTCATCTGCAGCTGAGGATTGGGATGTTGGCTCCTTCTATGANAACCAAGCACTAGTTCATTTAATGTCTGGAAGGTAGCTCGTGGGGTCACTGATTCATACGTGTTAATGTTCCTCCTCATCTTGCACCAATTTCCTTTATGAAGAAGATATAGAATCCCGGGTTTCCCAAATCCCAACACTAGTGCGCAAGAATCTTTCACG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00035	19938	26966	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000035s00004957.1	PF00069.20	Pkinase	310	571	3.00E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.225
SRR1783600	control	0.200
SRR1783602	moderate drought stress	1.593
SRR1811619	moderate drought stress	1.568

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.769
DRR006520	Root Summer glycyrrhizin high producing strain	1.865
DRR006521	Root Winter glycyrrhizin high producing strain	0.744
DRR006522	Root Winter glycyrrhizin high producing strain	0.782
DRR006523	Root Summer glycyrrhizin low producing strain	2.161
DRR006524	Root Summer glycyrrhizin low producing strain	2.193
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.096
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.095

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.327
SRR2868004	Drought Stress (root)	9.584
SRR2967015	Control (root)	4.951

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.034
SRR9715740	Leaf	0.031
SRR9715741	Leaf	0.000
SRR9715739	Root	2.068
SRR9715742	Root	0.656
SRR9715743	Root	1.265

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.126
SRR8749028	MeJA induced 9h	0.292
SRR8749029	MeJA induced 9h	0.202
SRR8749030	Uninduced	0.274
SRR8749031	Uninduced	0.293
SRR8749032	Uninduced	0.049

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.060
SRR8400027	Control - Root	2.442