Gene detail information of Glyur000034s00002982 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62630.1 | 9.00E-55 | Protein of unknown function (DUF1645) |
| NR | XP_007144991.1 | 1.88E-162 | hypothetical protein PHAVU_007G200400g [Phaseolus vulgaris] |
| trEMBL | tr|V7BHI7|V7BHI7_PHAVU | 7.00E-163 | Uncharacterized protein {ECO:0000313|EMBL:ESW16985.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 464949 | 466139 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000034s00002982.1 | PF07816.6 | DUF1645 | 111 | 364 | 3.40E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.217 |
| SRR1783600 | control | 27.336 |
| SRR1783602 | moderate drought stress | 35.616 |
| SRR1811619 | moderate drought stress | 35.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.816 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.352 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.389 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.304 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.488 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.375 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.010 |
| SRR2868004 | Drought Stress (root) | 15.019 |
| SRR2967015 | Control (root) | 14.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.708 |
| SRR9715740 | Leaf | 11.327 |
| SRR9715741 | Leaf | 12.294 |
| SRR9715739 | Root | 31.240 |
| SRR9715742 | Root | 17.548 |
| SRR9715743 | Root | 21.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.272 |
| SRR8749028 | MeJA induced 9h | 7.421 |
| SRR8749029 | MeJA induced 9h | 4.435 |
| SRR8749030 | Uninduced | 0.334 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.184 |
| SRR8400027 | Control - Root | 16.246 |