Gene detail

Gene detail information of Glyur000034s00002961

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G26820.1	iron-regulated protein 3
NR	XP_004495645.1	PREDICTED: solute carrier family 40 member 3, chloroplastic-like [Cicer arietinum]
Swissprot	tr\|Q8W4E7\|S40A3_ARATH	Solute carrier family 40 member 3, chloroplastic (Precursor)
trEMBL	tr\|A0A072VM68\|A0A072VM68_MEDTR	Solute carrier family 40 protein {ECO:0000313\|EMBL:KEH43109.1}

Sequence

Transcript Sequence

>Glyur000034s00002961.1
ACACAAATGAAAACTAGTTGCACTCTCCGCCCGTAGTCCAAAGGAACAACACAGGACGAAAATCCAGACACATACCGTTAATTAAAGATAAGATCTTTGCAGACACCCAGCACTTCATTTTCTTGGGNTTTATTTGGGTTAGTGGCAAAGTGATTAGCGAAGTTTTGGGATGAACGTTGAGTGAAAAAAAGGGGTTTTTTTTTTTCAGCGTAGTGAATGCTTTTGGGGACTGCATGAGTTGGGCGAAACCGAAGTGGTTCTTCTTCAAGTTTGGGAGCTTGAAGTTTTATAAGAGGCAAAAACTATGGCTATTGCTTCGGCCACCTTTAATCTCCATTTTGACAAATTCTCCATTCACCAAGCTCGTTTGTCGTCGAAGCAACCTTCCCCTCGAATGCNCCATCGCTTCCCTTCTTGTCGACGGTTGAACCTGAATTACCCTCTTGCCTCTCACAGATTTTCCTGTTTGAGTTCCAAATGTTCGATAACAAATACTGATGTACATTTGGAACATGTCACCAGTAATGAGGATCAGGGTGAGGGAGGGTCGTCTACAGTGGTTGAACATGAGTGTCCGGTGCCTATTAAACTCAAATCTGATATTCTGGAGACTGAGTCTTTGAACCTGCTCTCCAAAGCCACATTTGTAGATACTCTCTTGACAGCATTACCTGTTTTGTCTGAAGAGGAGCAACATGCCCTTGCAGCTACTCCAGCCCACCCAGCTGGGTTATATGCTTTCTACACCAGTTGCATTGTTGCAAATTTTGTGGAGCAGCTTTGGAATTTTGCTTGGCCTTCTGCCATTGCGTTGATTCATCCAAGCCTTTTGCCAGTTGCTGTGATGGGTTTCTTCACCAAAGTGGCTATAATTATTGGTGGTCCCTTGGTTGGCAAAGCAATGGACCATTTGCCCAGAGTGCCTACATATAATTTCTTCACTATTGCTGCTGCTCAGTTGTTATCTGCAGCTATGATTATTCATGCCCATTCTGTGCCTCCTACTTCAGTGTCTACTCTGCTTCTGCGTCCATGGTTCGTCATATTGGTTTCAGCCGGGGCTATTGAGAGGCTATGTGGCATGGCTTTGGGGGTTGCAAATGAGCGTGACTGGGTTGTGTTGCTGGCAGGAATGAATAGGCCGGTTGCACTTGCACAGGCAAATGCTGTACTAAATCGAATTGATCTCCTATGTGAGATAGTTGGAGCATTGCTGTTTGGAGTCCTTCTTTCCAAATTTCATCCTATTGTTTTAACATGTTTAGCCAACAAGCTTTCTACTGGTGTTCTTGACCGTCCTAAACCGTCGCAAACCTATTGCAGAACAGTAAATGAAGATTCTGCACCAGATGCTTACAGTCTAGTGGTTAAAGGTCTGGAAGCCATCAAGCTCGGCTGGAAGGAGTATCTGGGTCAGCCAGTTCTTCCTGCTAGTCTTGCATGGGTGCTCCTCTACTTCAACATTGTTCTTACACCAGGCAGTTTGATGACAGCATTTTTAACACAGCGTGGCTTACCTCCATCTGTCATTGGAGGATTCAGCGGAATNTGTGCTTTTATGGGTGTTGCCGCGACATTTGTGTCTTCAACTCTGGCTGGGGCAGTTGGGTTGGTGTTTCAAGCTTTACTTCTCAGCATGGCTGTTGCTGTATATTTGAGTGGATCAATATCTCATCAGAGCCCTCTTCTCATTTTCTTGTCTCTGATTATTTTGTCACGGCTTGGACACATGTCATATGATGTTGTAGGGGCGCAAATTGTCCAAACAGGGATCCCATCATCCAAAGCAAATCTCATTGGGACGACAGAGGTTGCTNTTGCAAGTTTGGCAGAGTCTATAATGCTTGGTGTTGCGATAATTGCAAATGATCCTTCTCATTTTGGATGTTTGGCAATGTTGTCTCTTCTATCAGTGGTCGGCGCGGCATGGATGTTCTGTAGATGGTTGTTGAATCCAACAGATGAACAAAAGAGCCTTTTTTCTTATGATCCTCNTTGTTCCATTCGCTGCCTTATTGCAAAGACTGTTGGAGACGAGAATCAAAGATTCAAAATATAGTGGAAAAAATTAGCATNGTGGGTGATTTACCCACCTAATACAGTACAGGAGCCTGAGGCGTTTCTTCTCACCTGGTCAAATGATATTAATTGTATGATCAAATTNTATTTATCTGTAAATGCGTAACATGCCTTCATATTATATTAGTGCACATAACAAATTGAATTAGCTACGTGCTTGGGTCCACCATGCACAAACGTTTTTGTAAAGCATTCGTTGATTTTTGAAGAAGAANAAAAATCCGCGGTTTAGAAATGTGAACAGATATGTTGCGGATTTGCGGTGATTCTGATAGGGTTTCCTAGGGAAATCTCAGTATCTCACGGTGTACACTTTTATTTAGATTTGGCCGAAGGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00034	360186	365535	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0034755 iron ion transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function
GO:0005381 iron ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000034s00002961.1	PF06963.7	FPN1	143	537	4.70E-90

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.926
SRR1783600	control	1.881
SRR1783602	moderate drought stress	1.552
SRR1811619	moderate drought stress	1.592

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.402
DRR006520	Root Summer glycyrrhizin high producing strain	2.461
DRR006521	Root Winter glycyrrhizin high producing strain	5.839
DRR006522	Root Winter glycyrrhizin high producing strain	5.708
DRR006523	Root Summer glycyrrhizin low producing strain	2.932
DRR006524	Root Summer glycyrrhizin low producing strain	2.998
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.972
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.882

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.378
SRR2868004	Drought Stress (root)	3.538
SRR2967015	Control (root)	4.228

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.239
SRR9715740	Leaf	33.807
SRR9715741	Leaf	17.812
SRR9715739	Root	1.926
SRR9715742	Root	3.347
SRR9715743	Root	2.332

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.935
SRR8749028	MeJA induced 9h	6.225
SRR8749029	MeJA induced 9h	5.657
SRR8749030	Uninduced	2.226
SRR8749031	Uninduced	2.696
SRR8749032	Uninduced	2.039

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.144
SRR8400027	Control - Root	10.023