Gene detail information of Glyur000034s00002951


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09300.11.00E-173Metallopeptidase M24 family protein
NRXP_004495639.10PREDICTED: probable Xaa-Pro aminopeptidase 3-like isoform X1 [Cicer arietinum]
COGYP_004465840.11.00E-85proline aminopeptidase P II [Alteromonas sp. SN2]
trEMBLtr|A0A072VM73|A0A072VM73_MEDTR0Xaa-pro aminopeptidase {ECO:0000313|EMBL:KEH43114.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00034304297312687-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0004177  aminopeptidase activity

GO:0008235  metalloexopeptidase activity

GO:0030145  manganese ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000034s00002951.1PF05195.11AMP_N431693.10E-31
Glyur000034s00002951.1PF00557.19Peptidase_M242104331.40E-48
Glyur000034s00002951.2PF05195.11AMP_N431693.10E-31
Glyur000034s00002951.2PF00557.19Peptidase_M242104331.40E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.297
SRR1783600control9.235
SRR1783602moderate drought stress15.086
SRR1811619moderate drought stress15.477

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.600
DRR006520Root Summer glycyrrhizin high producing strain13.995
DRR006521Root Winter glycyrrhizin high producing strain24.644
DRR006522Root Winter glycyrrhizin high producing strain23.662
DRR006523Root Summer glycyrrhizin low producing strain8.299
DRR006524Root Summer glycyrrhizin low producing strain8.229
DRR006525Leaf Summer glycyrrhizin high producing strain6.763
DRR006526Leaf Summer glycyrrhizin high producing strain6.531

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)12.283
SRR2868004Drought Stress (root)6.496
SRR2967015Control (root)7.659

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf4.856
SRR9715740Leaf7.509
SRR9715741Leaf7.324
SRR9715739Root5.661
SRR9715742Root9.019
SRR9715743Root7.960

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.482
SRR8749028MeJA induced 9h5.119
SRR8749029MeJA induced 9h6.675
SRR8749030Uninduced1.163
SRR8749031Uninduced0.333
SRR8749032Uninduced1.761

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root23.073
SRR8400027Control - Root21.154

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved