Gene detail information of Glyur000034s00002950 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09310.1 | 4.00E-48 | Protein of unknown function, DUF538 |
| NR | XP_004495638.1 | 9.61E-90 | PREDICTED: uncharacterized protein LOC101504472 [Cicer arietinum] |
| trEMBL | tr|B9RFL3|B9RFL3_RICCO | 5.00E-88 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF49984.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 301447 | 301959 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000034s00002950.1 | PF04398.7 | DUF538 | 27 | 138 | 1.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.337 |
| SRR1783600 | control | 12.808 |
| SRR1783602 | moderate drought stress | 8.376 |
| SRR1811619 | moderate drought stress | 8.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.205 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.892 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.057 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 119.643 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 116.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.039 |
| SRR2868004 | Drought Stress (root) | 10.421 |
| SRR2967015 | Control (root) | 8.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 80.501 |
| SRR9715740 | Leaf | 70.331 |
| SRR9715741 | Leaf | 43.331 |
| SRR9715739 | Root | 11.954 |
| SRR9715742 | Root | 15.881 |
| SRR9715743 | Root | 11.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.336 |
| SRR8749028 | MeJA induced 9h | 13.882 |
| SRR8749029 | MeJA induced 9h | 15.896 |
| SRR8749030 | Uninduced | 43.901 |
| SRR8749031 | Uninduced | 15.476 |
| SRR8749032 | Uninduced | 23.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 83.890 |
| SRR8400027 | Control - Root | 87.066 |