Gene detail information of Glyur000034s00002949 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09320.1 | 5.00E-57 | agenet domain-containing protein |
| NR | XP_003555795.1 | 9.20E-136 | PREDICTED: uncharacterized protein LOC100805605 [Glycine max] |
| trEMBL | tr|K7N2J9|K7N2J9_SOYBN | 1.00E-136 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G22810.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 297799 | 300258 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000034s00002949.1 | PF05641.7 | Agenet | 17 | 82 | 1.50E-18 |
| Glyur000034s00002949.1 | PF05641.7 | Agenet | 174 | 237 | 3.10E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.587 |
| SRR1783600 | control | 4.397 |
| SRR1783602 | moderate drought stress | 2.855 |
| SRR1811619 | moderate drought stress | 2.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.065 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.492 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.563 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.927 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.145 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.208 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.599 |
| SRR2868004 | Drought Stress (root) | 6.422 |
| SRR2967015 | Control (root) | 6.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.995 |
| SRR9715740 | Leaf | 1.462 |
| SRR9715741 | Leaf | 1.745 |
| SRR9715739 | Root | 4.735 |
| SRR9715742 | Root | 4.967 |
| SRR9715743 | Root | 2.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.005 |
| SRR8749028 | MeJA induced 9h | 5.224 |
| SRR8749029 | MeJA induced 9h | 5.017 |
| SRR8749030 | Uninduced | 1.044 |
| SRR8749031 | Uninduced | 0.284 |
| SRR8749032 | Uninduced | 0.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.320 |
| SRR8400027 | Control - Root | 7.354 |