Gene detail information of Glyur000034s00002915 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05858.1 | 6.00E-06 | |
| NR | KHN24201.1 | 4.67E-36 | hypothetical protein glysoja_045423 [Glycine soja] |
| trEMBL | tr|K7LJE3|K7LJE3_SOYBN | 2.00E-36 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G28361.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 158850 | 162601 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.628 |
| SRR1783600 | control | 1.667 |
| SRR1783602 | moderate drought stress | 1.001 |
| SRR1811619 | moderate drought stress | 1.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.868 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.661 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.275 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.454 |
| SRR2868004 | Drought Stress (root) | 2.786 |
| SRR2967015 | Control (root) | 2.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.343 |
| SRR9715740 | Leaf | 0.263 |
| SRR9715741 | Leaf | 0.330 |
| SRR9715739 | Root | 0.136 |
| SRR9715742 | Root | 0.938 |
| SRR9715743 | Root | 0.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.933 |
| SRR8749028 | MeJA induced 9h | 2.105 |
| SRR8749029 | MeJA induced 9h | 5.449 |
| SRR8749030 | Uninduced | 0.342 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.238 |
| SRR8400027 | Control - Root | 2.785 |