Gene detail information of Glyur000034s00002901 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26670.1 | 3.00E-05 | Pectinacetylesterase family protein |
| NR | XP_007145058.1 | 2.14E-22 | hypothetical protein PHAVU_007G206300g [Phaseolus vulgaris] |
| trEMBL | tr|V7BGR5|V7BGR5_PHAVU | 8.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:ESW17052.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 43877 | 44465 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.445 |
| SRR1783600 | control | 0.479 |
| SRR1783602 | moderate drought stress | 0.282 |
| SRR1811619 | moderate drought stress | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.124 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.329 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.806 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.077 |
| SRR2868004 | Drought Stress (root) | 4.715 |
| SRR2967015 | Control (root) | 5.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.185 |
| SRR9715740 | Leaf | 6.174 |
| SRR9715741 | Leaf | 2.832 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.123 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.225 |
| SRR8400027 | Control - Root | 0.057 |