Gene detail information of Glyur000033s00008657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09440.2 | 2.00E-37 | Heat shock protein 70 (Hsp 70) family protein |
| NR | KHG30764.1 | 9.97E-46 | Heat shock cognate 70 kDa [Gossypium arboreum] |
| COG | YP_003626189.1 | 9.00E-17 | chaperone protein DnaK [Moraxella catarrhalis RH4] |
| Swissprot | tr|P09189|HSP7C_PETHY | 5.00E-45 | Heat shock cognate 70 kDa protein |
| trEMBL | tr|A2ZH18|A2ZH18_ORYSI | 8.00E-46 | Putative uncharacterized protein {ECO:0000313|EMBL:EAY81902.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 533901 | 534113 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000033s00008657.1 | PF00012.15 | HSP70 | 9 | 71 | 4.40E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1878.047 |
| SRR1783600 | control | 1712.035 |
| SRR1783602 | moderate drought stress | 2330.528 |
| SRR1811619 | moderate drought stress | 2159.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4892.974 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4857.687 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 830.522 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 804.774 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3650.552 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3566.136 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 410.961 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 437.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 638.762 |
| SRR2868004 | Drought Stress (root) | 547.743 |
| SRR2967015 | Control (root) | 685.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 148.200 |
| SRR9715740 | Leaf | 179.679 |
| SRR9715741 | Leaf | 225.435 |
| SRR9715739 | Root | 1095.491 |
| SRR9715742 | Root | 1484.277 |
| SRR9715743 | Root | 1176.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 744.158 |
| SRR8749028 | MeJA induced 9h | 600.597 |
| SRR8749029 | MeJA induced 9h | 236.088 |
| SRR8749030 | Uninduced | 69.252 |
| SRR8749031 | Uninduced | 41.385 |
| SRR8749032 | Uninduced | 261.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1205.453 |
| SRR8400027 | Control - Root | 1338.106 |