Gene detail information of Glyur000033s00008650 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13580.1 | 4.00E-46 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | KEH41221.1 | 7.78E-85 | disease resistance-responsive, dirigent domain protein [Medicago truncatula] |
| Swissprot | tr|Q9T0H8|DIR18_ARATH | 2.00E-62 | Dirigent protein 18 (Precursor) |
| trEMBL | tr|A0A072VHX9|A0A072VHX9_MEDTR | 3.00E-85 | Disease resistance-responsive, dirigent domain protein {ECO:0000313|EMBL:KEH41221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 483097 | 483816 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000033s00008650.1 | PF03018.9 | Dirigent | 23 | 126 | 2.20E-07 |
| Glyur000033s00008650.1 | PF03018.9 | Dirigent | 129 | 175 | 1.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.637 |
| SRR1783600 | control | 0.637 |
| SRR1783602 | moderate drought stress | 0.340 |
| SRR1811619 | moderate drought stress | 0.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.601 |
| SRR2868004 | Drought Stress (root) | 27.984 |
| SRR2967015 | Control (root) | 23.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.171 |
| SRR9715742 | Root | 0.950 |
| SRR9715743 | Root | 1.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.667 |
| SRR8400027 | Control - Root | 12.738 |