Gene detail information of Glyur000033s00008648 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24020.1 | 4.00E-75 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | KEH41221.1 | 5.37E-155 | disease resistance-responsive, dirigent domain protein [Medicago truncatula] |
| Swissprot | tr|Q7Y225|DIR16_ARATH | 5.00E-109 | Dirigent protein 16 (Precursor) |
| trEMBL | tr|A0A072VHX9|A0A072VHX9_MEDTR | 2.00E-155 | Disease resistance-responsive, dirigent domain protein {ECO:0000313|EMBL:KEH41221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 461620 | 462384 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000033s00008648.1 | PF03018.9 | Dirigent | 120 | 253 | 2.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.448 |
| SRR1783600 | control | 0.477 |
| SRR1783602 | moderate drought stress | 0.874 |
| SRR1811619 | moderate drought stress | 0.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.296 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.418 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.493 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.444 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.434 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.268 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 69.912 |
| SRR2868004 | Drought Stress (root) | 59.219 |
| SRR2967015 | Control (root) | 47.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.947 |
| SRR9715740 | Leaf | 0.934 |
| SRR9715741 | Leaf | 0.681 |
| SRR9715739 | Root | 0.311 |
| SRR9715742 | Root | 0.610 |
| SRR9715743 | Root | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.183 |
| SRR8749028 | MeJA induced 9h | 2.085 |
| SRR8749029 | MeJA induced 9h | 0.355 |
| SRR8749030 | Uninduced | 0.905 |
| SRR8749031 | Uninduced | 0.810 |
| SRR8749032 | Uninduced | 0.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.605 |
| SRR8400027 | Control - Root | 2.210 |