Gene detail information of Glyur000033s00008597 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62810.1 | 4.00E-10 | complex 1 family protein / LVR family protein |
| NR | XP_007144319.1 | 7.81E-18 | hypothetical protein PHAVU_007G146200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BHG0|V7BHG0_PHAVU | 3.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW16313.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 53842 | 55369 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.242 |
| SRR1783600 | control | 5.443 |
| SRR1783602 | moderate drought stress | 4.239 |
| SRR1811619 | moderate drought stress | 3.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.571 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.597 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.576 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.569 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.284 |
| SRR2868004 | Drought Stress (root) | 5.512 |
| SRR2967015 | Control (root) | 5.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.889 |
| SRR9715740 | Leaf | 4.986 |
| SRR9715741 | Leaf | 5.288 |
| SRR9715739 | Root | 4.183 |
| SRR9715742 | Root | 5.671 |
| SRR9715743 | Root | 6.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.686 |
| SRR8749028 | MeJA induced 9h | 22.599 |
| SRR8749029 | MeJA induced 9h | 24.845 |
| SRR8749030 | Uninduced | 14.020 |
| SRR8749031 | Uninduced | 26.440 |
| SRR8749032 | Uninduced | 24.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.330 |
| SRR8400027 | Control - Root | 5.164 |