Gene detail information of Glyur000033s00008596 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11920.1 | 5.00E-39 | glutaredoxin-related |
| NR | KHN04589.1 | 5.62E-62 | hypothetical protein glysoja_021888 [Glycine soja] |
| COG | YP_001998414.1 | 9.00E-12 | glycoside hydrolase 15-like protein [Chlorobaculum parvum NCIB 8327] |
| trEMBL | tr|G7ZXU0|G7ZXU0_MEDTR | 3.00E-62 | Ras GTPase activation domain-containing protein {ECO:0000313|EMBL:AES84028.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 50461 | 52315 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000033s00008596.1 | PF04784.9 | DUF547 | 44 | 82 | 9.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.247 |
| SRR1783600 | control | 0.297 |
| SRR1783602 | moderate drought stress | 0.419 |
| SRR1811619 | moderate drought stress | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.036 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.339 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.397 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.966 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.706 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.474 |
| SRR2868004 | Drought Stress (root) | 0.495 |
| SRR2967015 | Control (root) | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.183 |
| SRR9715740 | Leaf | 0.017 |
| SRR9715741 | Leaf | 1.633 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.310 |
| SRR9715743 | Root | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.815 |
| SRR8749028 | MeJA induced 9h | 0.392 |
| SRR8749029 | MeJA induced 9h | 1.188 |
| SRR8749030 | Uninduced | 1.442 |
| SRR8749031 | Uninduced | 3.014 |
| SRR8749032 | Uninduced | 3.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.228 |
| SRR8400027 | Control - Root | 0.223 |