Gene detail information of Glyur000033s00008594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02020.1 | 1.00E-21 | |
| NR | AFK35384.1 | 1.83E-68 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S542|I3S542_LOTJA | 7.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:AFK35384.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00033 | 27738 | 31611 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.328 |
| SRR1811619 | moderate drought stress | 0.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.500 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.496 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.764 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.580 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.233 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.005 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.771 |
| SRR2868004 | Drought Stress (root) | 108.697 |
| SRR2967015 | Control (root) | 91.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.351 |
| SRR9715740 | Leaf | 5.178 |
| SRR9715741 | Leaf | 11.222 |
| SRR9715739 | Root | 2.306 |
| SRR9715742 | Root | 4.878 |
| SRR9715743 | Root | 5.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.017 |
| SRR8749028 | MeJA induced 9h | 130.773 |
| SRR8749029 | MeJA induced 9h | 106.842 |
| SRR8749030 | Uninduced | 272.557 |
| SRR8749031 | Uninduced | 310.254 |
| SRR8749032 | Uninduced | 265.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.390 |
| SRR8400027 | Control - Root | 9.210 |