Gene detail

Gene detail information of Glyur000032s00003933

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G23090.1	0	sulfate transporter 91
NR	XP_004505279.1	0	PREDICTED: probable sulfate transporter 3.3-like isoform X1 [Cicer arietinum]
COG	YP_005320855.1	5.00E-91	sulfate transporter [Saprospira grandis str. Lewin]
Swissprot	tr\|Q9SXS2\|SUT33_ARATH	0	Probable sulfate transporter 3.3
trEMBL	tr\|A0A072UMG1\|A0A072UMG1_MEDTR	0	Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 {ECO:0000313\|EMBL:KEH30847.1}

Sequence

Transcript Sequence

>Glyur000032s00003933.1
GGAGATTAACTNAACCGTATAGTTGCCCACTAATTTCACTGCTAATGCTATCTCTTCCCTGNTTTTTGATTTCTGAAATTATTTCTCATATAAATATAAATTGTTTTTATCCCTTTGTACTCTAGTTGACAAAGGTGCGATCTTGTTTTATAGCGGTTTTTGCAGATGTGTTGATTACTGGCCTAGTACGGGGAGGGAGGCTCACATAAAAGGCAGCATTGCATTGCTCAAATTAACCACAAGAAGCTATACACACCACACCATCATTTTCTCTTCTCTTCTATTCAATGGAGCCTAATAATAATGCCTGCAGCATGCATTCGCATTGCATAGAAATGATGAGCATGGAAGTACACCAAGTTGTTCCACCACCCCACAAGAGCACCTTACAGAAGCTCAAGGCCAGGCTCAAGGAAACTTTTTTCCCTGATGATCCCCTGCGCCAATTCAAGGGACAACCCCTCAAGAGAAAACTTATTCTTGGAGCTCAATATTTGTTCCCTATTCTTCAATGGGGTCCTAATTACAACCTCAAGCTCTTTAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGTTTAGCCATCCCACAGGGAATCAGTTATGCTAAGCTTGCANGTCTTCCTCCAATTGTGGGACTCTATTCTAGNTTTGTTCCCCCACTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTATCTATTGCTTCTCTTGTGTTGGGATCGATGCTGAGGCAGGAAGTGTCTCCCTCAGCAGACCCAGTTCTGTTTCTTCAGCTAGCTTTTACTTCAACATTCTTTGCTGGTCTCTTTCAANCTTCTCTGGGAATCCTAAGGTTAGGATTTATCATTGATTTTTTATCAAAGGCGATCCTTATTGGGTTCATGGCTGGAGCTGCTGTGATTGTCTCTCTGCAACAACTCAANAGCCTCCTTGGAATCACACATTTCACCAAACAGATGGGCCTTGTTCCTGTTATGAGTTCTGTTTTCCACAATACACATGAGTGGTCATGGCAAACAATATTGATGGGAATTTGCTTCTTGGTGTTACTACTACTAGCGAGACACATTAGCATAAGGAAACCAAGGCTATTCTGGGTTTCAGCTGGAGCTCCTCTTGTTTGTGTCATCATCTCTACTCTTCTGGCTTTTGCAATTAAGGCTCAAAATCATGGCATCAGTGTAATCGGAAAACTGCATGAAGGAATAAATCCTCCTTCATGGAATATGTTGCGCTTTCANGGAAGTCACCTTGGTCTAGTCTTGAAAACTGGGCTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTTGGAAACTACAAGGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTTATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGCTCAGCTGTTAACAATAACGCGGGTGCAAAAACAGCAGCCTCAAATGTAGTAATGTCTGTGACGGTCATGGTGACACTCCTTTTACTCATGCCATTGTTCCAATACACGCCTAATGTTGTGTTGGGTGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATATCCCTGCTGCTTTTCACATTTGGAAGGTGGACAAATTCGACTTCCTTGTGATGTTGACTGCTTTCTTGGGTGTTGTTTTTATCTCAGTCCAAGAAGGCCTTGCTCTTGCAGTCGGGTTATCAACTTTTAAGATACTGATGCAAATTACAAGGCCTAAAACAGTAATGTTGGGGAAGATACCAGGGACAGACATATATAGAAATCTTCATCAATACAAGGAGGCTGTAAAAATACCAGGCTTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAACGAGAGGTTCGTTTCAGCTTTGCAAAGTTTATCAAGTATGGCATTCCGATGGATTGAAGACGAAGGAGAAAACATAAAGGAACGCTCAAGCCTTCGATTTTTAATCTTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAGGCAACACTGGAAAAAAAGGGTGTTGAGCTGGTGCTGGTGAATCCTCTTGCTGAGGTCATTGAAAAGCTGAAAAAAGCAGACGAAGCTAACGATTTCATACGAGCAGATAACCTTTTCTTGACTGTTGGAGAGGCTGTGGCTTCACTCTCAGCAGCAATGAAGAGCCAATCAACCACGACAGAAGAAGCACACACAATTGTGCCACATTACTGATTAATTGATTAAGATTGCAGAATAAATACGCAAAGATTAAAAAGAAGTAGAAGCAGCAGAAACAGAATACCATGGAATTCATATAAATCAATTATTGTAACATCCTACAGTTTACACTTTAAATGATTAAAGTGAAGTGTAAATTTGTCAGTTGTGACNGCTGCTTATTAGATTTGCCCCACAAGCATTTTGATCATAATGAGAACAACTTATTGCGTGTTAATTCAAGCATTCACGTTGATCTCCATGCACTCTTCAGCACATCTAATTCAACAAAATTCCTAGCTAAGATGTTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00032	442644	447877	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0008271 secondary active sulfate transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000032s00003933.1	PF13792.1	Sulfate_tra_GLY	71	153	8.30E-31
Glyur000032s00003933.1	PF00916.15	Sulfate_transp	184	462	9.10E-96
Glyur000032s00003933.1	PF01740.16	STAS	517	645	4.10E-26
Glyur000032s00003933.2	PF13792.1	Sulfate_tra_GLY	71	153	8.10E-31
Glyur000032s00003933.2	PF00916.15	Sulfate_transp	184	462	8.80E-96
Glyur000032s00003933.2	PF01740.16	STAS	517	634	5.80E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.083
SRR1783600	control	12.168
SRR1783602	moderate drought stress	11.278
SRR1811619	moderate drought stress	10.986

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.968
DRR006520	Root Summer glycyrrhizin high producing strain	25.220
DRR006521	Root Winter glycyrrhizin high producing strain	58.085
DRR006522	Root Winter glycyrrhizin high producing strain	56.434
DRR006523	Root Summer glycyrrhizin low producing strain	27.091
DRR006524	Root Summer glycyrrhizin low producing strain	27.326
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.218
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.955

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.084
SRR2868004	Drought Stress (root)	9.421
SRR2967015	Control (root)	7.176

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.214
SRR9715740	Leaf	29.519
SRR9715741	Leaf	22.325
SRR9715739	Root	1.260
SRR9715742	Root	8.188
SRR9715743	Root	7.837

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.223
SRR8749028	MeJA induced 9h	0.097
SRR8749029	MeJA induced 9h	0.033
SRR8749030	Uninduced	0.100
SRR8749031	Uninduced	0.043
SRR8749032	Uninduced	0.088

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.673
SRR8400027	Control - Root	21.913