Gene detail information of Glyur000032s00003923 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDO63899.1 | 2.06E-09 | hypothetical protein CISIN_1g038960mg [Citrus sinensis] |
| trEMBL | tr|A0A067F933|A0A067F933_CITSI | 8.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:KDO63899.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 360515 | 361865 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003923.1 | PF06839.7 | zf-GRF | 71 | 107 | 2.80E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.124 |
| SRR1783600 | control | 0.256 |
| SRR1783602 | moderate drought stress | 20.006 |
| SRR1811619 | moderate drought stress | 20.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.808 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.718 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.357 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.003 |
| SRR2868004 | Drought Stress (root) | 0.671 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.422 |
| SRR9715740 | Leaf | 29.679 |
| SRR9715741 | Leaf | 19.624 |
| SRR9715739 | Root | 17.983 |
| SRR9715742 | Root | 16.636 |
| SRR9715743 | Root | 18.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.975 |
| SRR8400027 | Control - Root | 60.844 |