Gene detail information of Glyur000032s00003921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08480.1 | 5.00E-54 | |
| NR | XP_004505293.1 | 2.56E-94 | PREDICTED: uncharacterized protein LOC101496013 [Cicer arietinum] |
| trEMBL | tr|G7JJZ6|G7JJZ6_MEDTR | 9.00E-91 | Surface antigen family protein, putative {ECO:0000313|EMBL:AES90106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 355160 | 359065 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.662 |
| SRR1783600 | control | 39.243 |
| SRR1783602 | moderate drought stress | 30.146 |
| SRR1811619 | moderate drought stress | 29.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 91.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 89.825 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 86.058 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 84.298 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.354 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.389 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 235.814 |
| SRR2868004 | Drought Stress (root) | 212.813 |
| SRR2967015 | Control (root) | 174.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.353 |
| SRR9715740 | Leaf | 100.970 |
| SRR9715741 | Leaf | 127.144 |
| SRR9715739 | Root | 49.977 |
| SRR9715742 | Root | 77.447 |
| SRR9715743 | Root | 68.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 122.750 |
| SRR8749028 | MeJA induced 9h | 73.915 |
| SRR8749029 | MeJA induced 9h | 110.072 |
| SRR8749030 | Uninduced | 93.557 |
| SRR8749031 | Uninduced | 67.525 |
| SRR8749032 | Uninduced | 96.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 150.254 |
| SRR8400027 | Control - Root | 134.667 |