Gene detail

Gene detail information of Glyur000032s00003918

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64950.1	4.00E-152	cytochrome P450, family 89, subfamily A, polypeptide 5
NR	XP_003529424.1	0	PREDICTED: cytochrome P450 89A2-like [Glycine max]
COG	YP_006592045.1	7.00E-26	cytochrome P450 [Methylocystis sp. SC2]
Swissprot	tr\|Q9SRQ1\|C89A9_ARATH	0	Cytochrome P450 89A9
trEMBL	tr\|I1KM77\|I1KM77_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G34560.1}

Sequence

Transcript Sequence

>Glyur000032s00003918.1
ATGGAGACGTGGTTCCTCGTCCTTGTCTCCGCTTGCGTCTGCCTCCTCATCAGAGCCATCATCCTCTNCCTCACCACCAAAACCACCACCGCCATTAACATCCCTCCGGGCCCTCCCCAAATCCCCATCATCACCAGCTTCCTATGGCTCAGAAAATCATTCTCCCAACTCGAACCCTTTCTCAAAACCCTCCACGCCAAACACGGCCCTATCATCTCCCTCCGAATCGGCTCACGCCCCTCCGTCTTCATCGCCGACCGTTCCCTCGCCCACAACGCCCTCATCCAAAACGCCTCCCTCTTCTCCGACCGCCCCAAACCCCTCCCCGTCAGCAAACTCCTCAACAGCAACCAGCACAACATAAGCTCCGCCTCGTACGGCGCCANGTGGCGCTCCCTCCGCCGCAACCTCGCCTCCGAGATGCTTCACCCCTCGCGTGTAACCTCCTTCTCCGAAATCCGCACGTGGGTCCTACGCTCCCTCCTCCACCGCCTCAAACAAGAAGAATCATCACGTTCCTCCTCCGTCAGGGTCATCGACCACTTCCAGTACGCCATGTTCTGCCTCCTCGTCTTCATGTGTTTCGGCCAGAGGGTCCACGATCAGAAAGTGAAGGACATCGAGCGCGTCCAGCGCACGCTTCTCTTGAGCCTCAACAGATTCAACATCCTCAATTTCTGGCCCAAACTCACTCGGATTTTTTTCCGGAAACGTTGGGAACAGTTGTTGAGGCTTCGGAAGGAGCAAGATAGCGTGCTGGTTCCGTTGATAAGAGCGAGGAAGCAAGCCAGGGAAGAAGGTAGATTAAGCGGTGAAGACTACTCTGTTGTTTCGTACGTGGATACTCTGTTGGAATTGGAGTTGCCGGAGGAGAAACGCAAGCTGAACGAAGCGGAAATTGTGAGCTTGTGTTCGGAATTTCTGAACGCGGGAACGGATACAACGTCGACGGCGTTGCAGTGGATCATGGCGAATCTGGTGAAGTACCCGCACGTGCAAAACAGGGTCGTGGAAGAGATTAGGGAGGTGGTGGGTGGTGGAGAAGAAAAGGAAGTGAAAGAGGAAGACTTGCAGAAACTGCCTTATCTGAAAGCTGTGATTTTGGAAGGACTGAGGCGTCACCCACCTGGGCACTTTGTGCTACCCCATGCGGTTACAGAGGATGTGGTTTTGAACGGTTACTTGGTGCCGAAGAATGGGACGGTGAATTTCATGGTGGCGGAGATGGGGTGGGACCCTAAGGTGTGGGAGGATCCAATGGCGTTCAAGCCAGAGAGGTTCTTGGAAAATGATGGGGAGGTTGAGGGGTTTGACATTACGGGGAGGAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATCTGTCCTGGGTATAATTTGGCTTTGCTCCATTTGGAATACTTTGTGGCCAATTTGGTTTGGAATTTTGATTGGAAGGTTCCCGAGGGAGGGAGTGTTGATTTGTCGGAGAAACAGGAGTTTACTATTGTCATGAAAAATCCACTGCAGGTTCATCTTTCTCCTAGGATCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00032	341755	343293	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP89A5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000032s00003918.1	PF00067.17	p450	35	503	8.80E-103

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.146
SRR1783600	control	19.301
SRR1783602	moderate drought stress	53.494
SRR1811619	moderate drought stress	52.210

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	26.581
DRR006520	Root Summer glycyrrhizin high producing strain	26.448
DRR006521	Root Winter glycyrrhizin high producing strain	50.828
DRR006522	Root Winter glycyrrhizin high producing strain	50.418
DRR006523	Root Summer glycyrrhizin low producing strain	58.289
DRR006524	Root Summer glycyrrhizin low producing strain	58.437
DRR006525	Leaf Summer glycyrrhizin high producing strain	61.407
DRR006526	Leaf Summer glycyrrhizin high producing strain	61.117

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	35.476
SRR2868004	Drought Stress (root)	82.776
SRR2967015	Control (root)	60.895

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	72.827
SRR9715740	Leaf	192.016
SRR9715741	Leaf	113.122
SRR9715739	Root	70.055
SRR9715742	Root	50.258
SRR9715743	Root	50.792

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.300
SRR8749028	MeJA induced 9h	4.317
SRR8749029	MeJA induced 9h	2.790
SRR8749030	Uninduced	0.857
SRR8749031	Uninduced	0.191
SRR8749032	Uninduced	0.673

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.618
SRR8400027	Control - Root	28.192