Gene detail information of Glyur000032s00003895 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19840.1 | 3.00E-52 | phloem protein 2-A1 |
| NR | AFK41435.1 | 4.71E-134 | unknown [Lotus japonicus] |
| Swissprot | tr|O81865|P2A01_ARATH | 6.00E-63 | Protein PHLOEM PROTEIN 2-LIKE A1 |
| trEMBL | tr|I3SME3|I3SME3_LOTJA | 2.00E-134 | Uncharacterized protein {ECO:0000313|EMBL:AFK41435.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 209729 | 211239 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003895.1 | PF14299.1 | PP2 | 171 | 326 | 7.20E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.580 |
| SRR1783600 | control | 24.669 |
| SRR1783602 | moderate drought stress | 32.424 |
| SRR1811619 | moderate drought stress | 26.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.319 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.660 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.197 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.288 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 80.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.569 |
| SRR2868004 | Drought Stress (root) | 9.591 |
| SRR2967015 | Control (root) | 14.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.333 |
| SRR9715740 | Leaf | 18.990 |
| SRR9715741 | Leaf | 10.574 |
| SRR9715739 | Root | 2.009 |
| SRR9715742 | Root | 8.803 |
| SRR9715743 | Root | 8.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.103 |
| SRR8749028 | MeJA induced 9h | 0.288 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.187 |
| SRR8749031 | Uninduced | 0.362 |
| SRR8749032 | Uninduced | 0.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.511 |
| SRR8400027 | Control - Root | 7.522 |