Gene detail information of Glyur000031s00004432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G06536.1 | 4.00E-46 | SPla/RYanodine receptor (SPRY) domain-containing protein |
| NR | XP_007136705.1 | 0 | hypothetical protein PHAVU_009G067000g [Phaseolus vulgaris] |
| trEMBL | tr|V7AT08|V7AT08_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08699.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 498342 | 500799 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004432.1 | PF00622.23 | SPRY | 301 | 396 | 2.70E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.346 |
| SRR1783600 | control | 2.472 |
| SRR1783602 | moderate drought stress | 2.319 |
| SRR1811619 | moderate drought stress | 2.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.971 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.906 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.307 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.126 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.838 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.779 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.469 |
| SRR2868004 | Drought Stress (root) | 21.063 |
| SRR2967015 | Control (root) | 18.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.214 |
| SRR9715740 | Leaf | 4.973 |
| SRR9715741 | Leaf | 3.535 |
| SRR9715739 | Root | 1.556 |
| SRR9715742 | Root | 2.092 |
| SRR9715743 | Root | 2.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.519 |
| SRR8749028 | MeJA induced 9h | 37.895 |
| SRR8749029 | MeJA induced 9h | 23.401 |
| SRR8749030 | Uninduced | 24.916 |
| SRR8749031 | Uninduced | 55.456 |
| SRR8749032 | Uninduced | 27.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.382 |
| SRR8400027 | Control - Root | 5.219 |