Gene detail

Gene detail information of Glyur000031s00004430

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47820.2	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_004501554.1	0	PREDICTED: chromosome-associated kinesin KIF4A-like isoform X1 [Cicer arietinum]
Swissprot	tr\|P46869\|FLA10_CHLRE	2.00E-77	Kinesin-like protein FLA10
trEMBL	tr\|I1JTL7\|I1JTL7_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000031s00004430.1
CAACTACCCTTTTTTTCCCTCACTCACTCACTCACTCGCTCATTCATTCATTCTCTCTTACTCTCCACATCTCTAAAACTATATTACTTTCTCTCTCTTGCATTGTCGGAGACTCTCTCCGCTTCCGCTTCCGCTTCAGCTTCAGCTTCTGCATAAAGCGAATTGATCTTTCGTTGAAGCTCTTTCTGGCTCTGATTCACTCTCTTTCAGTAATCTCTCTCTGTTCGTAAGCTGCTTCCCCATGGAAGCAGGGGAAGATTGTTGCGTTAAGGTCGCAGTCCATGTACGGCCACTCATCGCCGACGAGAAGCTNCAAGGCTGCAAAGATTGTGTCACCGTCATCGCCGGGAAGCCTCAGGTGCAAATTGGCGCCCACTCATTTACATTTGATCATGTCTATGGAAGCACTGGTTCTCCCTCCTGTAACATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCCACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGAACCGGCTTCAAAGAAGGTTTCCAAACAGGAATAATACCCCAAGTTATGAATGTTTTGTTCAACAAAATTGGTACCTTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGTTGGATTCCTCCTCCGTGAGCAAACCAGAAACTGCAAATGGACACGCAGGAAAAATGACCTCTCCTGGGAAGCCGCCAATACAAATTCGTGAGACATCAAATGGTGTTATAACCCTTGCAGGGTCTACTGAAGTCAGTGTCACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAGGGATCCTTGAGTAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGCCGATCTCATGCCATATTCACCATCACATTAGAGCAAATGCGGAAGCTCAATATTCCTAATGACGGCTGCTCAAACGACACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTTGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGATCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGGGGCAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAACGCTGAGGAAACCCTAAACACTTTGAAGTATGCAAATCGTGCACGTAATATCCAAAATAAGCCTGTTGTCAACAGAGATCCCATGTCCAATGAGATGCTAAAAATGNGACAACAACTGGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGGCTCATCTGAGGAAGTTCAGGTCCTTAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATATCGTAGTAGATGCTCTGGTGTAGAACAAAATGAAAAGGATGCTTATGATGGTGGCACATGCATTGTGAAGACTGATGGGCTTAAGAGGAGCTTACCTATCATAGCGGCTGATTATCCAATGAGTGAAACAGCAGGTGATTCAAGGGAAATCGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGACTGAGATGAAGCTTTTTGGAGTATCTGACGCTGAAGTCCTCAAACAGCACTTTGGAAGGAAGATAATGGAACTGGAGGATGAGAAGAGAGCAGTGAAGCAAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGGACAGATTCTAGATCTGAAAAAGAAGCAAGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAATCTATAAAGGCCCAAAAGGTTCAATTACAACAAAGGATTAAACAAGAAGCAGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTGTTGCAATTAAGGAAGGAGGGAAGAAGAAATGAGTATGAAAAGCACAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTTCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCAACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGTAAAACTTCGAGCCGGGACACTTTAGTTGCAACGAATGGAATGAATGGGCAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCACGAACTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAAGAGTTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCNAAGGGTCTCAGTCCTCCAAGAGGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGTTGAGCATATCCTCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAACGAGAACGGGCATTCACAAATCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTTGTCGGTCTTTTACGGCAAAGTGAGATGAAAAGAAAGGAAGCTGAGAAAGAGCTTAAAGTGAGAGAGCAAGCTGTCACAACCACATTGGCTACACCAGCTTCAGGAAACTCTCCAAATTCATTGCAACAATATACTGAAGATATGAAGGGACTTTTATCTCCAATGTCTGTGCCAATACCAAGACAACTCAAATATACACCCGGGGTTGCTAATGGCTTAATGAAGGAATCGGCAGCATTTGTAGATCAGGGTAAAAGGATGGTACCCATCGGGCAGCTGTCGATGAAAAAATTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTAGTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCAAGACCACGCTCACAGGCTCACAGGCTTTGACCCACATCATGTGATCTTTCATGATCAGCCCAGTTGCTGTAGCTCTGTATCTTTTGACCCCCCCAAGAATTATCCTAGACACATGGCAATATGGCATTGGAAATAACAGAGAACTAGGCGCAGTGTTAACATAAGTGGTTGCTGAAAGTGTATGGCTGTCACTTGTCAGTCTTGAATAATGCTGTCCAAGTCTTGGATTTTGCCATAATTACTGTATATGGAACATCTTAGGAGGTTTGTTGCAATGAAATGTTTGGACAGCTACCCAAATAATGAAACACAGAAGATATCGCTTGCTTGAAGACGAATTCGTAGGTTCTGTTAGACAATATCTTGGAAAACAGTCTGTTCATACCAACACTAGAAGAAACTAAGGAGAGATTCTTTTGTCAGCTCCTGGAAATGTGTATTTAACATCTTTTATTCCTTATTGTATGTTCTTATGGTCCTATTGTGTTTAAGGCAATTGATTTTTGTCGATAGATTTTATGTTG

Protein Sequence

>Glyur000031s00004430.1
MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVIAGKPQVQIGAHSFTFDHVYGSTGSPSCNMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGFQTGIIPQVMNVLFNKIGTLKHQIDFQLHVSFIEILKEEVRDLLDSSSVSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPNDGCSNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMXQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSGVEQNEKDAYDGGTCIVKTDGLKRSLPIIAADYPMSETAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGVSDAEVLKQHFGRKIMELEDEKRAVKQERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEGQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTLVATNGMNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEAEKELKVREQAVTTTLATPASGNSPNSLQQYTEDMKGLLSPMSVPIPRQLKYTPGVANGLMKESAAFVDQGKRMVPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRSQAHRL

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00031	476791	488394	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000031s00004430.1	PF00225.18	Kinesin	16	363	1.70E-103
Glyur000031s00004430.2	PF00225.18	Kinesin	16	88	1.50E-08
Glyur000031s00004430.2	PF00225.18	Kinesin	116	391	3.60E-86
Glyur000031s00004430.3	PF00225.18	Kinesin	16	88	1.50E-08
Glyur000031s00004430.3	PF00225.18	Kinesin	116	391	3.50E-86

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.749
SRR1783600	control	16.588
SRR1783602	moderate drought stress	18.865
SRR1811619	moderate drought stress	18.886

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.754
DRR006520	Root Summer glycyrrhizin high producing strain	18.550
DRR006521	Root Winter glycyrrhizin high producing strain	6.324
DRR006522	Root Winter glycyrrhizin high producing strain	6.029
DRR006523	Root Summer glycyrrhizin low producing strain	19.370
DRR006524	Root Summer glycyrrhizin low producing strain	19.569
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.866
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.550

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	36.331
SRR2868004	Drought Stress (root)	30.628
SRR2967015	Control (root)	39.470

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	25.506
SRR9715740	Leaf	20.917
SRR9715741	Leaf	23.820
SRR9715739	Root	1.436
SRR9715742	Root	15.982
SRR9715743	Root	12.967

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.471
SRR8749028	MeJA induced 9h	14.881
SRR8749029	MeJA induced 9h	10.529
SRR8749030	Uninduced	4.162
SRR8749031	Uninduced	2.155
SRR8749032	Uninduced	1.860

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.862
SRR8400027	Control - Root	42.548