Gene detail

Gene detail information of Glyur000031s00004419

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16150.1	9.00E-155	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
NR	XP_007136713.1	0	hypothetical protein PHAVU_009G067800g [Phaseolus vulgaris]
COG	YP_629420.1	1.00E-82	asparaginase [Myxococcus xanthus DK 1622]
Swissprot	tr\|Q8GXG1\|ASPGB_ARATH	0	Isoaspartyl peptidase/L-asparaginase 2 subunit beta (Precursor)
trEMBL	tr\|V7AST5\|V7AST5_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW08707.1}

Sequence

Transcript Sequence

>Glyur000031s00004419.1
CTACGCACAACAACAACACACACACACAAAGACAGGGAAAGGAAGCGTGTAGAGCAAAGAGTGAGAGAGAGAGAGAAGAATGGGGGGTTGGGCTATAGCGGTGCATGGTGGCGCTGGTGTGGACCCTAATCTCCCACCCGAGCGTCAGGAAGAAGCGAAGCAACTCCTCACTCGCTGTCTCAATCTTGGCATCTCTGCTCTTCGTGCCAATGCTTCCGCCGTCGTTGTCGTTGAACTTGTCGTGAGGGAACTGGAAACGGATCCCCTGTTCAACTCTGGCCGTGGATCTGCTTTGACGGAGAAGGGAACGGTGGAGATGGAGGCCAGCATCATGGATGGTTCCAAGAGAAGATGCGGCGCCGTTTCTGGCCTCACCACCGTGAAAAACCCGGTCACACTCGCTCGCCTTGTCATGGACAAGTCCCCACATTCCTACCTCGCATTCTCCGGCGCCGAAGAATTCGCCAGGCAACAGGGCGTGGAGGTTGTGGACAACGAGTACTTCATCACACCCGATAATGTTGGTATGCTGAAACTGGCGAAGGAAGCAAATGCAATCCTGTTTGATTACAGGATTCCGGGTGGATACGACAAGTGTGGCGCAGGGGTTGAGAGTCCACTGCAAATGAATGGACTGCCAATCAGCGTATACGCGCCCGAGACGGTTGGGTGCGTGGTGGTGGACAGCGAGGGAAGGTGTGCGGCTGCCACGTCGACAGGGGGACTCATGAACAAGATGAGCGGTAGGATCGGTGACTCGCCCCTCATTGGCGCTGGGACCTACGCGTGTGAGGTGTGTGGGGTCTCCTGCACNGGTGAAGGGGAAGCCATCATACGTGGCACCCTGGCGCGTGAGGTGGCGGCGGTCATGGAATACAAGGGCCTGGGACTTCAAGAGGCCGTGGACTTTGTCATCAAGAACCGTCTCGATGATGGGAAGGCTGGGCTCATTGCTGTTTCCAATACTGGGGAAGTGGCTTATGGGTTTAACTGTAATGGCATGTTCAGGGGCTGCGCCACTGAGGATGGGTTCATGGAGGTTGGAATCTGGGAATAAAATGTGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00031	413963	415747	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000031s00004419.1	PF01112.13	Asparaginase_2	3	319	5.50E-99

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.034
SRR1783600	control	0.035
SRR1783602	moderate drought stress	0.036
SRR1811619	moderate drought stress	0.036

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.185
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.646

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.982
SRR2868004	Drought Stress (root)	7.083
SRR2967015	Control (root)	10.326

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	304.087
SRR9715740	Leaf	166.452
SRR9715741	Leaf	184.257
SRR9715739	Root	0.293
SRR9715742	Root	0.647
SRR9715743	Root	0.819

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.211
SRR8749028	MeJA induced 9h	20.728
SRR8749029	MeJA induced 9h	22.506
SRR8749030	Uninduced	245.013
SRR8749031	Uninduced	312.538
SRR8749032	Uninduced	297.976

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.362
SRR8400027	Control - Root	0.320