Gene detail

Gene detail information of Glyur000031s00004416

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G19130.1	3.00E-88	S-locus lectin protein kinase family protein
NR	XP_007136716.1	0	hypothetical protein PHAVU_009G068100g [Phaseolus vulgaris]
COG	YP_004571825.1	1.00E-23	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|P17801\|KPRO_MAIZE	0	Putative receptor protein kinase ZmPK1 (Precursor)
trEMBL	tr\|V7ATU1\|V7ATU1_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW08710.1}

Sequence

Transcript Sequence

>Glyur000031s00004416.1
ATGCAAATCCCAGTCTTCCTCCTCCTCCTCCTCCTCCTTTTGTTTGCCCCAACTTCATTTGCGGCGAAAGACACGCTCCCAGAAAGCTCGTCTCTTTCAGTTGAGAAACCAACAGACACACTTGTNTCAGCCAATGGGGATTTCTCCGCGGGATTCTTCCAAGTCGGAGACAACGCTTTCTGTTTCTCCGTCTGGTTCACAAGGTCCAAAGAACCCACCGTTATTTGGATGGCGAATCGCGACGAACCCGTCAATGGAAAAGGCTCAAAACTATCCCTTTCGAAAGACGGGAATCTCGTTTTAATCGATGCAGGGAGAACCACCGTTTGGACCACCGCCACCGTGTCACCCTTCCAGTTACAACTAAAGCTCACAAACAACGGCAACCTCGTTNTAACCAATTTACACGGCACTAACTTCATTTGGCAAAGCTTCGATTCCCCAACGGATACGCTCCTTCCTGGTCAAGCAGTGACAGAGCGAGCAAGCCTGGTTTCATCGAGGAGCACGAACAACTATTCCTCTGGTTCCTATAAACTCTACTTCGACAACGACAATGCCCTTCGCTTGCTTTTCAAAGGTCCCATGTTTTCCAGCGTGTATTGGCCATCCCCATGGCTATTGCCCNTTGATATAGGAAGATCCACCTATAACGTCACCAAAATCGCTGTCCTTGATGCCTTTGGCCATTTCACTTCCTCCGATGGGTTCCAATTCTTTTCCACCGATTATCGTAAAAGACTTTATCGACGTGTCAAGATGGACCCTGATGGTAACTTTCGTGTATCGTGGCAAGCGATTTCANAACCATGTACGGTTCATGGACTTTGTGGAGCTAACAGCATGTGCACTCATGACCCAGTCAATGGAAGGACTTGCTATTGTTTGAAGGGACACAGGGTTAAGGATCCAAATGACTGGACACAAGGGTGCGAGCCTGAGTTTAATTACACTGCTGATGAGCTTTCTTGCAACAACAATCGCACCGAGTCTTTTTTGGGTTTCCTCCATCTTCCAAACACGGAGTTGTTTGGCTATGACTGGAACGTAACCCGAGTTACAAGCCTGAAGGAGTGTCAAAACATATGTTTGGGACTGTGTGATAAATGCAAAGCCATCCAACTCAAATTCAACGAGTTCTCTACTTATAATTGTTACCCCAAAACGTTATTCCTCAACGGGCGGGATTCCCCCAATTTCGACGGTGATATCTACCTGAAGTTGCCGAAAGCGACCCTGCACTCTTCTGATCATAAGCCTATTAAAAAACACTCACCTTTGAATTGTTCCATTGGTTTGTCTCAACCCCTGCAAAGGACATATCAGAAGCCAAAAAGAAACTCCACGTTAAGTTTCTTGGTTTGGTTTGCTTCAGCAATAGGGGTCTTTGAGATGNCCACTATTTTTCTCGTGTGGTTCTTTCTGTTTAGAACCAACAAACAAACACCTGGTAGTAGTGGTGGAGATCAACAAGGGTACCTTCTTTCAGCTACGAGATTTCAAAGGTTCACCTATGCAGAGCTTAAAAGCGCAACAAAGGGGTTCCGTGAAGAGATTGGGCGCGGGGCTGGAGGGGTTGTTTACAAAGGAGCATTGAGTGATGATCGTGTTGCTGCTATCAAACGTTTGAGCGAAGCTAATATTCAAGGAGAAGCTGAATTCCTCGCTGAGATAAGCACCATNGGAATGTTGAACCACATGAATTTGATTGATATGTGGGGATACTGCGTCGAAGGGAAGCACAGGATATTGGTGTATGAGTACATGGAACATGGATCCTTAGCGAANAATCTCTCTTCTAATGTTCTTGATTGGGATAAGAGGTTTAATGTGGCTTTAGGAACAGCGAAAGGTTTGGCTTATTTACACGAAGAGTGTTTGGAATGGGTTTTACATTGCGATGTGAAGCCTCAGAACATTCTCCTTGACTCTGATTTCCAACCAAAGGTTGCGGATTTTGGTTTGTCAAAGCTTTTGAACAGAGATGAGCGTGGAAGCTCTGCTTTTTCAAGAATAAGAGGGACTCGGGGTTATATGGCTCCTGAGTGGGTTTACAATCTTAGAATTACTTCTAAAGTGGATGTTTATAGCTACGGGGTTGTGGTGTTGGAAATGGTAACAGGAAAGAGTCCAATGGGAATTNATAGCGTTGAGAATAGTACTGGGGGCATAGAACAACATCGGTTGGTGACGTGGGTGAAAGACAAGCTAAACAGTGCACCCACACCAATGTTTTGGGTTGAGGAGATTGCAGATCCTTACTTGGAAGGACTATACGATGTTTCGCAGGTTGAGGTTTTGGTTAAAGTGGCTTTGCAATGTGTGCAAGATGACATGAATGAAAGACCNTCCATGAGCCAAGTAGTGGAGATGCTTGCTCAGTCCCATGAAAAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00031	390900	393626	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04733	IRAK4	EC:2.7.11.1	NF-kappa B signaling pathway	map04064
			Toll-like receptor signaling pathway	map04620
			Toll and Imd signaling pathway	map04624
			NOD-like receptor signaling pathway	map04621
			Neurotrophin signaling pathway	map04722
			Pertussis	map05133
			Tuberculosis	map05152
			Measles	map05162
			Influenza A	map05164
			Toxoplasmosis	map05145
			Leishmaniasis	map05140
			Chagas disease (American trypanosomiasis)	map05142

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000031s00004416.1	PF01453.19	B_lectin	73	171	1.60E-25
Glyur000031s00004416.1	PF00069.20	Pkinase	517	790	2.80E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.389
SRR1783600	control	0.389
SRR1783602	moderate drought stress	0.646
SRR1811619	moderate drought stress	0.622

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.135
DRR006520	Root Summer glycyrrhizin high producing strain	0.134
DRR006521	Root Winter glycyrrhizin high producing strain	0.093
DRR006522	Root Winter glycyrrhizin high producing strain	0.091
DRR006523	Root Summer glycyrrhizin low producing strain	3.315
DRR006524	Root Summer glycyrrhizin low producing strain	3.336
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.588
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.545

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.269
SRR2868004	Drought Stress (root)	21.804
SRR2967015	Control (root)	29.150

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.231
SRR9715740	Leaf	2.957
SRR9715741	Leaf	10.512
SRR9715739	Root	0.081
SRR9715742	Root	1.014
SRR9715743	Root	0.547

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.728
SRR8749028	MeJA induced 9h	20.546
SRR8749029	MeJA induced 9h	10.871
SRR8749030	Uninduced	12.072
SRR8749031	Uninduced	66.515
SRR8749032	Uninduced	26.978

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.386
SRR8400027	Control - Root	4.949