Gene detail information of Glyur000031s00004395 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19540.1 | 3.00E-131 | Protein of unknown function (DUF620) |
| NR | XP_004499014.1 | 0 | PREDICTED: uncharacterized protein LOC101491039 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1M8S0|I1M8S0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G09640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 299766 | 302334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004395.1 | PF04788.7 | DUF620 | 159 | 380 | 6.80E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.365 |
| SRR1783600 | control | 2.269 |
| SRR1783602 | moderate drought stress | 3.683 |
| SRR1811619 | moderate drought stress | 3.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.236 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.107 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.609 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.676 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.549 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.259 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.407 |
| SRR2868004 | Drought Stress (root) | 1.220 |
| SRR2967015 | Control (root) | 1.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.436 |
| SRR9715740 | Leaf | 2.449 |
| SRR9715741 | Leaf | 1.949 |
| SRR9715739 | Root | 8.354 |
| SRR9715742 | Root | 2.408 |
| SRR9715743 | Root | 3.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.770 |
| SRR8749028 | MeJA induced 9h | 7.796 |
| SRR8749029 | MeJA induced 9h | 4.471 |
| SRR8749030 | Uninduced | 2.334 |
| SRR8749031 | Uninduced | 0.145 |
| SRR8749032 | Uninduced | 1.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.317 |
| SRR8400027 | Control - Root | 5.792 |