Gene detail information of Glyur000031s00004391 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48810.1 | 2.00E-14 | cytochrome B5 isoform D |
| NR | XP_006578046.1 | 6.36E-70 | PREDICTED: cytochrome B5 isoform-like [Glycine max] |
| Swissprot | tr|P49098|CYB5_TOBAC | 1.00E-17 | Cytochrome b5 |
| trEMBL | tr|K7KI22|K7KI22_SOYBN | 2.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G04695.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 279481 | 285357 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004391.1 | PF00173.23 | Cyt-b5 | 90 | 141 | 8.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.974 |
| SRR1783600 | control | 43.762 |
| SRR1783602 | moderate drought stress | 36.646 |
| SRR1811619 | moderate drought stress | 38.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.703 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.965 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.580 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.508 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.536 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.713 |
| SRR2868004 | Drought Stress (root) | 44.747 |
| SRR2967015 | Control (root) | 60.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 137.307 |
| SRR9715740 | Leaf | 28.430 |
| SRR9715741 | Leaf | 52.974 |
| SRR9715739 | Root | 105.209 |
| SRR9715742 | Root | 63.109 |
| SRR9715743 | Root | 70.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.297 |
| SRR8749028 | MeJA induced 9h | 24.882 |
| SRR8749029 | MeJA induced 9h | 32.096 |
| SRR8749030 | Uninduced | 20.813 |
| SRR8749031 | Uninduced | 10.282 |
| SRR8749032 | Uninduced | 15.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 196.856 |
| SRR8400027 | Control - Root | 149.736 |