Gene detail information of Glyur000031s00004388 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006848887.1 | 6.07E-08 | hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda] |
| trEMBL | tr|T1M1L7|T1M1L7_TRIUA | 2.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_11322-P1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 271020 | 272460 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.453 |
| SRR1783600 | control | 19.265 |
| SRR1783602 | moderate drought stress | 31.343 |
| SRR1811619 | moderate drought stress | 29.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.496 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.468 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.351 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.819 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.761 |
| SRR2868004 | Drought Stress (root) | 2.925 |
| SRR2967015 | Control (root) | 4.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.967 |
| SRR9715740 | Leaf | 0.720 |
| SRR9715741 | Leaf | 1.006 |
| SRR9715739 | Root | 0.861 |
| SRR9715742 | Root | 2.412 |
| SRR9715743 | Root | 2.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.063 |
| SRR8749028 | MeJA induced 9h | 0.257 |
| SRR8749029 | MeJA induced 9h | 0.016 |
| SRR8749030 | Uninduced | 0.015 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.600 |
| SRR8400027 | Control - Root | 1.111 |