Gene detail information of Glyur000031s00004366 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27460.1 | 1.00E-170 | no pollen germination related 1 |
| NR | XP_003523621.1 | 0 | PREDICTED: tetratricopeptide repeat protein 7A-like isoform X1 [Glycine max] |
| COG | YP_001655194.1 | 2.00E-08 | hypothetical protein MAE_01800, partial [Microcystis aeruginosa NIES-843] |
| Swissprot | tr|Q9M8Y0|SEC_ARATH | 2.00E-07 | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC |
| trEMBL | tr|I1JTR1|I1JTR1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G04850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 156276 | 159675 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.496 |
| SRR1783600 | control | 2.524 |
| SRR1783602 | moderate drought stress | 1.989 |
| SRR1811619 | moderate drought stress | 1.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.277 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.039 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.975 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.142 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.104 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.273 |
| SRR2868004 | Drought Stress (root) | 2.996 |
| SRR2967015 | Control (root) | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.497 |
| SRR9715740 | Leaf | 0.598 |
| SRR9715741 | Leaf | 0.341 |
| SRR9715739 | Root | 0.641 |
| SRR9715742 | Root | 1.866 |
| SRR9715743 | Root | 1.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.224 |
| SRR8749028 | MeJA induced 9h | 1.461 |
| SRR8749029 | MeJA induced 9h | 1.891 |
| SRR8749030 | Uninduced | 0.623 |
| SRR8749031 | Uninduced | 0.535 |
| SRR8749032 | Uninduced | 0.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.761 |
| SRR8400027 | Control - Root | 3.829 |