Gene detail information of Glyur000031s00004345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49780.1 | 9.00E-11 | phytosulfokine 4 precursor |
| NR | KHN45129.1 | 3.21E-25 | Phytosulfokines 3 [Glycine soja] |
| Swissprot | tr|Q9M2Y0|PSK3_ARATH | 1.00E-13 | Phytosulfokine-beta (Precursor) |
| trEMBL | tr|K7KT52|K7KT52_SOYBN | 1.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G05081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 46129 | 46940 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004345.1 | PF06404.7 | PSK | 18 | 80 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.126 |
| SRR1783600 | control | 10.209 |
| SRR1783602 | moderate drought stress | 38.529 |
| SRR1811619 | moderate drought stress | 37.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.954 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.136 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.596 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.790 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.813 |
| SRR2868004 | Drought Stress (root) | 33.395 |
| SRR2967015 | Control (root) | 47.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.680 |
| SRR9715740 | Leaf | 1.017 |
| SRR9715741 | Leaf | 1.614 |
| SRR9715739 | Root | 7.182 |
| SRR9715742 | Root | 8.539 |
| SRR9715743 | Root | 8.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.121 |
| SRR8749028 | MeJA induced 9h | 0.335 |
| SRR8749029 | MeJA induced 9h | 0.207 |
| SRR8749030 | Uninduced | 0.645 |
| SRR8749031 | Uninduced | 0.261 |
| SRR8749032 | Uninduced | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.912 |
| SRR8400027 | Control - Root | 29.704 |